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Domain assignment for XP_006172808.1.101512 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006172808.1.101512
Domain Number 1 Region: 23-142,334-644
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 2.62e-68
Family Integrin alpha N-terminal domain 0.000089
Further Details:      
 
Domain Number 2 Region: 162-357
Classification Level Classification E-value
Superfamily vWA-like 1.51e-45
Family Integrin A (or I) domain 0.00000411
Further Details:      
 
Domain Number 3 Region: 644-791
Classification Level Classification E-value
Superfamily Integrin domains 1.26e-24
Family Integrin domains 0.0019
Further Details:      
 
Domain Number 4 Region: 792-929
Classification Level Classification E-value
Superfamily Integrin domains 1.05e-21
Family Integrin domains 0.0049
Further Details:      
 
Domain Number 5 Region: 965-1092
Classification Level Classification E-value
Superfamily Integrin domains 0.0000000000131
Family Integrin domains 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_006172808.1.101512
Sequence length 1167
Comment PREDICTED: integrin alpha-10 isoform X1 [Camelus ferus]; AA=GCF_000311805.1; RF=representative genome; TAX=419612; STAX=419612; NAME=Camelus ferus; AL=Scaffold; RT=Major
Sequence
MELPLIPYLSLPLVLLTGLCCPFNLDVHRPRLFPGPPEAEFGYSVLQHVVGGQRWMLVGA
PWDGPSGDRRGDVYRCPVGGSHNAPCAKGHLGDYPLGNSSRPAVNMHLGMSLLETDGDGG
FMACAPLWSRACGSSVFSSGICTHVDASFQPQGSLAPTAQRCPTYMDVVIVLDGSNSIYP
WSEVQTFLRRLVGRLFIDPEQIQVGLVQYGESSVHEWSLGDFRTKEEVVRAARNLSRREG
RETKTAEAITVACTEGFSQSRGGRPEAARLLVVVTDGESHDGEELPTALKACEAGRVTRY
GIAVLGHYLRRQRDPSAFLREIRAIASDPDERFFFNVTDEAALTDIVDALGDRIFGLEGS
HGENESSFGLEMSQIGFSTHQLKDGILFGMVGAYDWGGSVLWLGEDHRLFPPRTALEDEF
PPALQNHAAYLGYSVSSMLLRGGRRLFLSGAPRFRHRGKVIAFQFKKDGAVRVAQSLQGE
QIGSYFGSELCPLDTDGDGTTDVLLVAAPMFLGPQNKETGRVYVYLVGQQSLLTLQGTLQ
PEPPQDARFGFAMGALPDLNQDGFADVAVGAPLEDGHRGALYIYHGSRSGVRPRPAQRVA
AVSMPQALSYFGRSVDGRLDLDGDDLVDVAVGAQGAAVLLSSRPIVHLAPSLEVTPPAIS
VVQRDCRRRGQEAACLSAALCFQVTSRTPGRWDRRFYVRFTASLDEWTAGARAAFDGSGQ
RLSPRRLWLSVGNVTCEQLHFHVQDTSDYLRPVVLTVTFALDNTTKPGPVLEEGSPTFIR
KLVPFSKDCGPDNECVTDLALRASMDIRGSRKEPFVVRGGRRKVLVSAALENREENAYNT
SLSLSFSRNLHLSSFTPQRDSAVKVECAAPSPHSRLCSVGHPVFRSGGKVTFLLEFEFSC
SFLLSQVLVRLTAASNSLERNGTLQDNTVQTSAYIQYEPHLLFASESTLHRYEVHPHGTL
PVGPGPEFKTTLRVQNLGCYVVSGLIISALLPAVAHGGHYFLSLSQVITNNASCTVQNLT
EPPGRPVHPEELQDTSRLNGSNARCQVVRCHLGRLAKGTEVSVGLLRLVHNEFFRRAKFK
SLTVVSTFELGTEEGSVLRLTEASRWSESLLEVIQTRPVLLSLWVLVGSILGGLLLLALL
VFCLWKLGFFTRKKIPEGEKREEKLEQ
Download sequence
Identical sequences XP_006172808.1.101512

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