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Domain assignment for XP_006173154.1.101512 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006173154.1.101512
Domain Number 1 Region: 33-482
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.03e-92
Family Integrin alpha N-terminal domain 0.000000000000675
Further Details:      
 
Domain Number 2 Region: 775-997
Classification Level Classification E-value
Superfamily Integrin domains 1.02e-57
Family Integrin domains 0.00024
Further Details:      
 
Domain Number 3 Region: 635-768
Classification Level Classification E-value
Superfamily Integrin domains 3.19e-37
Family Integrin domains 0.0000975
Further Details:      
 
Domain Number 4 Region: 482-634
Classification Level Classification E-value
Superfamily Integrin domains 6.8e-32
Family Integrin domains 0.0000968
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_006173154.1.101512
Sequence length 1035
Comment PREDICTED: integrin alpha-IIb [Camelus ferus]; AA=GCF_000311805.1; RF=representative genome; TAX=419612; STAX=419612; NAME=Camelus ferus; AL=Scaffold; RT=Major
Sequence
MARALCPLRALWLLEWVQLLLGPGAAPPTWALNLDPVQLTVYTGSNDSDFGFSLDFFKDS
HGSVSIVVGAPRAEGRSQEKTGGVFLCPWKAEGGQCNPLVFDLNDETRTIGTQTLQTFKA
GQGLGASVVSWRDNIVACAPWQHWNVLENTEEAEKTPVGGCFVAQLQNSGRAEYSPCRDN
TMSQAYSKSQFGDKRYCEAGFSSAVTQAGELVLGAPGGYFFLGLLARVPIADIISNYRQG
TLLWHVPTQQLTFDDSRPEYYDGYRGYSVAVGEFDGNLNTTEYVFGAPTWRWTLGAVEIL
GSYYQRLHQLHGEQMASYFGHSVAVTDVNGDGKHDLLVGAPLYMENRADRKLAEVGRVYL
FLQSRGSRVLGGPSLLLTGTQLYGRFGSAIAPLGDLNRDGYNDVAVAAPYGGPNGRGQVL
VFLGQSEGLNSHPSQVLDSPFPTVSGFGFSLRGATDIDDNGYPDLLVGAYGANKVVVYRA
QPVVRVVVQLLVQDSLNPAVKNCDLPQTKTRVSCFNIDICVGATGHNIPKKLRLNAELQL
DRQKPRQGRRGLLLASQQASTILHLDLGERSSTICQNITAFLRDEADFRDKLSPIMLSFN
MSLQPEMDGIVPVSVLHGDTHVQKQTRIILDCGEDDLCVPQLQLTANVTGSPLLIGADNV
LELQMDAANKGEGAYEAELAVHLPPGAHYMQALSNNKDFERLICNQKKENETKVVLCELG
NPMKRNAQIGITMLVSVGNLEEAGEQVSFRLQIKSKNSQNPNSETVVLDVPVRAKAHVEL
RGNSFPASLVVVAEESNKENSSDSWGPKVEHTYELHNNGPGTVSGLRLLLGLPGQSQPSD
LLYILDIQPQGGLQCSPEPSPNPLKLDWGLPTPSPSPLYPAHHKRDRRQAFLSEKKQPSR
LQDSILVSCDSAPCTVVQCELQEMTRGQRAMVTVLAFLWLPSLARPLDQFVLQSHAWFNV
SSLPYAVPALSLPSGEALVQTQLLQVLEERDIPIWWVLVGVLGGLLLLTLLVLAMWKLGF
FKRNRPPLEEEDEEE
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Identical sequences XP_006173154.1.101512

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