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Domain assignment for XP_006182037.1.101512 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_006182037.1.101512
Domain Number 1 Region: 142-385
Classification Level Classification E-value
Superfamily vWA-like 6.27e-77
Family Integrin A (or I) domain 0.000000579
Further Details:      
 
Domain Number 2 Region: 387-472
Classification Level Classification E-value
Superfamily Integrin domains 2.77e-21
Family Integrin domains 0.0019
Further Details:      
 
Domain Number 3 Region: 44-102
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000199
Family Plexin repeat 0.00073
Further Details:      
 
Domain Number 4 Region: 590-629
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000209
Family Integrin beta EGF-like domains 0.0066
Further Details:      
 
Domain Number 5 Region: 546-584
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000809
Family Integrin beta EGF-like domains 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_006182037.1.101512
Sequence length 766
Comment PREDICTED: integrin beta-8 [Camelus ferus]; AA=GCF_000311805.1; RF=representative genome; TAX=419612; STAX=419612; NAME=Camelus ferus; AL=Scaffold; RT=Major
Sequence
MRRSALAFFTATFVCLQNCRPGPAPFLRAAWMFSVVLGLGQSEDNRCASSNAVSCTKCLA
LGPECGWCAQEDFISGGSRNERCDILSNLINKGCSIDSIEYPSVHVIPSENEINTQVTPG
EVLIQLRPGAAANFMLKIHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFS
RDFRLGFGSYVDKTVSPYISIHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAV
HRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVV
PNDGNCHLKNNVYVRSTSMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGT
IAGEIESKAANLNNLVVEAYQKLISEVRVQVENQVKGVYFNITAICPDGTKKPGTDGCGN
VTSNDEVLFNVTVTMEKCNVTGGKSYAIIKPIGFNETTKLHIHRNCSCQCDDSRGPKRKC
VEETFLDGKCFQCDENNCHFDEDQLPSESCKSHKDQPVCSGRGVCICGKCLCHKIKLGKV
YGKYCEKDDFSCPYHHGNLCAGHGDCEAGKCQCFRGWEGDRCQCPSASAQYCVNPKGQVC
SGRGTCVCGRCECTDPRSIGRFCEHCPTCHTACNENWNCVQCLHPHNLSQAMFDRCKTSC
ALKEHYVDQTPECFSSPSYLRIFFIIFIITFLIGLLKVLIIRQVILQWNSNKIKSSADYR
VSASKKDKLILQSVCTRAVTYRREKPEEIKMDISKLNAHETFRCNY
Download sequence
Identical sequences XP_006182037.1.101512

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