SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006891876.1.29581 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006891876.1.29581
Domain Number 1 Region: 302-415
Classification Level Classification E-value
Superfamily ARID-like 1.57e-34
Family ARID domain 0.00032
Further Details:      
 
Domain Number 2 Region: 563-668
Classification Level Classification E-value
Superfamily Chromo domain-like 1.14e-19
Family Chromo barrel domain 0.01
Further Details:      
 
Domain Number 3 Region: 59-113
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.00000000211
Family Tudor domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_006891876.1.29581
Sequence length 1256
Comment PREDICTED: AT-rich interactive domain-containing protein 4A [Elephantulus edwardii]; AA=GCF_000299155.1; RF=representative genome; TAX=28737; STAX=28737; NAME=Elephantulus edwardii; AL=Scaffold; RT=Major
Sequence
MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPL
RVGAIVETRTADGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIAKKTNRGRRSSLPVTEDEKEEESSEEEDEDKRRLNDELLGKVVN
VMSTPEKTECYPALVISPSCNDDITVKKDQCLVRSFTDSKFYSIARKDIKEVDILTLPES
ELSAKPGLQKASIFLKTRVVPDNWKMDISEILESSSSDDEDGPAEENDEEKEKETKKEEE
EVPEEELDPEERDNFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHQGGCDNID
SGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTIHHHEPKVKEE
KKDFEESMEEVLKEDQEMPLVEVKSEPEENIDSNSESERDEIELKSPRGRRKIVRDANCV
TKEIEEEKTEDKLKDNDAENKDVDDDETTEKKENELLLGRKSTPKQKEKKITKQEDSDKD
SDEEEEKSQEREETESKCDSEGEEDEEDMEPCLTGTKVKVKYGRGKTQKIYEASIKSTEI
DDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDKGGPKKKQKKKAKNKEDLEKDEKRDEER
QKSKRGRPPLKSTLSSNMPYGLSKTPNSEGKSDSCSSDSETEDPLEKNLMNEELSPDIKE
EVEKNEHLSDDKLDEENPKIAHILKENDRTQMQPLETLKLEVGENEQIVQIFGSKVEQII
DIKKEAEKSPKGKGRRSKTKDISLEIIKISSLSQDEAGCEPQTEAQNLEYSALDNKDFSS
AEDEIDQCIKGKKLKRKILGQSSPEKKIRLENGMEIPNSLSQERTSDCVGTEGMKNLNFE
QHFETENEGMPSLIAESNQNIQELTSEKSSSPAEEIVNTSLKEEEDAMPLIGPETLVCHE
VDLDDLDEKEKTNVEDVVVESSESNSLVSIPPALPPVVQPNFSVASPLTLSQDESRSIKS
ESDITIEVDSIAEESQEGLCERESANGFEASVASTTCSIIIQERENREKGQKRPSDGNSE
LLTKKLKRTPKRISAVAKNEKNGAGQSSDSEDLPVVENSNKCTPVKHLSVSKPQKLTRSP
ARISPHIKDGEKDKHREKHPNSSPRTYKWSFQLNELDNMNSSERISFLQEKLQEIRKYYM
SLKSEVATIDRRRKRLKKKDREVSHTGASMSSASSDTGMSPSSSSPPQNVLAVECR
Download sequence
Identical sequences XP_006891876.1.29581

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]