SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_007257338.1.101067 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_007257338.1.101067
Domain Number 1 Region: 5832-6065
Classification Level Classification E-value
Superfamily Plakin repeat 3.4e-86
Family Plakin repeat 0.0000000306
Further Details:      
 
Domain Number 2 Region: 2006-2238
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 9.05e-86
Family Calponin-homology domain, CH-domain 0.000000646
Further Details:      
 
Domain Number 3 Region: 5257-5496
Classification Level Classification E-value
Superfamily Plakin repeat 1.31e-81
Family Plakin repeat 0.000000202
Further Details:      
 
Domain Number 4 Region: 4926-5165
Classification Level Classification E-value
Superfamily Plakin repeat 5.1e-80
Family Plakin repeat 0.000000154
Further Details:      
 
Domain Number 5 Region: 4601-4838
Classification Level Classification E-value
Superfamily Plakin repeat 2.62e-77
Family Plakin repeat 0.000000188
Further Details:      
 
Domain Number 6 Region: 5594-5818
Classification Level Classification E-value
Superfamily Plakin repeat 2.53e-68
Family Plakin repeat 0.00000113
Further Details:      
 
Domain Number 7 Region: 6141-6182,6218-6412
Classification Level Classification E-value
Superfamily Plakin repeat 4.62e-68
Family Plakin repeat 0.000000279
Further Details:      
 
Domain Number 8 Region: 2254-2369
Classification Level Classification E-value
Superfamily Spectrin repeat 6.28e-24
Family Spectrin repeat 0.003
Further Details:      
 
Domain Number 9 Region: 3133-3310
Classification Level Classification E-value
Superfamily Spectrin repeat 1.44e-17
Family Spectrin repeat 0.012
Further Details:      
 
Domain Number 10 Region: 2557-2693
Classification Level Classification E-value
Superfamily Spectrin repeat 4.83e-17
Family Spectrin repeat 0.0041
Further Details:      
 
Domain Number 11 Region: 2427-2591
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000874
Family Spectrin repeat 0.0051
Further Details:      
 
Domain Number 12 Region: 6088-6134
Classification Level Classification E-value
Superfamily Plakin repeat 0.00000000314
Family Plakin repeat 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_007257338.1.101067
Sequence length 6478
Comment PREDICTED: plectin isoform X2 [Astyanax mexicanus]; AA=GCF_000372685.1; RF=representative genome; TAX=7994; STAX=7994; NAME=Astyanax mexicanus; AL=Scaffold; RT=Major
Sequence
MVAGMVMPLNHLRAIYERLFRDGVMVAKKDKRPQTKHPEIQGVGNLQVIRAMGSLKSRGF
VRETFTWRHFYWYLTNEGIVYLRDYLHLPPEIVPTPLQRVRKPAATLAVAQRDTRVQAIE
GPTSYVPKPGRRGAESQEAFLQRQEYRRREMTTKEEQVFSDKTPRFRGRPIAGDQINPNA
PFRDQVQPYSRSGQGYAKEVDQRKTTPVVSSQLLPAESTSAQSLKWKTTKAEFNKGTSEA
ALIKKSLYTKTMAEVELAPKSAVTSLAAGTVAASMSHKKPKEEISIQISRETITSNPAQH
VTPPPFSEKQVAKTMKATEAKNVHDHSVKDEMTKVTEKMSVTQTMTSEEYSTRNEIALKK
TSPKAPVTVDLPAHPAVSATKAETVPVMASMPPNKSSKEKFKDKVSINISQETNKKQANN
ATQPPSSQKKVETIVKASVTENVLEHPVKEVTEVTEQVSTLAIEKNVTLEICRSGDKTSL
IESLPSATISMDPPTQPAVNVATGDTIAVTTNKTHKEKKKDKKSQVLQELSTREEANDAT
QCLSSKKKQGKKVKATVTELVQEPAVSDEVPTVIESVSVVVTQEKTKSEDYSKSGEEISI
QCLANTTASENLPAQVSFKMENPDASVTQVSSDKTSKKTVTEEVSVIISQETKDASLPAS
AKKKAGKKQKAAAAKSGQDDPMKDKTPKMTEEDSLSATQILTTENYTSNDAIALDERLPK
TAVTVDLQAQISTTTVDVVAVMPSESSSKSAKEKLGESVSEEKPQETSMSKEQVQDGSIL
SSSKKKRDKKQKSTKLDLDNSENVKKMTDQKSLPKTAATDDLLTQLPAATKETVAATTSV
CSNKTDKEKLEVSIKVSQDANTREQADDATQSPASKKEVEKKLKGSVSLMSPDESRKMTL
KEEISVNNSQETKDEILDEVSMTATQNMISENYTSTNMTALIDSAPKTVTVNDDLPVISS
GSSSNAEEKKLEVSVEQQQETSVNKDKAQDASLPSSSKKKREKKQKAAIIKNVHPVEDEV
PDVAEKVSVSLMSDQESLSKTGDLLTKLPATTTETVAATAFNKTDKEKLEVSAHDSQDAN
AREQANNAIQSSLLKKEVKQTVKSSLTENVQQNTISEKTIKVTEKISMLVTQEKTSSKDS
SESGGEKVIVELPAQVVTTTENTVVSMTSDKSSKKMLNQEAPIIISQEKEDVSLSASSKK
KAGKKQKAVATTSVHNDPVKDGAPKVIEEVSMSTTQMLTTENYTSSDATASTGDLLTKHS
ATTTETVAAIAHECTNKTDKEKLEATINVSEDVNTKEQAGDTTLSSSLKKDAEKTVDPVT
ENVQEKTRSEDSSEIEEKVLIKSLPKTKASEEEVSVIIPQEAKDASLPASTKKKAGKKQR
AAAKSVQADPMKDEAPKRTEEVSLSATQMKIPSEDLPNTEGLQKTVIITLDLPTQISPTT
ADIVAVLPSEHSSKFNEEKLEEAASVETPQEISASKEQAQDSSVPSSSKKKREKKPKASI
TKNIHTVEDEIPEVAEKVSVSLTSESAVQPEDLCLDLEKTENTKEVKDQDQHLRSSGSAV
PPVAQKEKDTALLDVNLDADKDEANIAQQTAATVVATVPSAVTSSNAQKSKKKKAKKTSS
IEETKDSDVASEKSEQTSLNAAKDVEIPVAETSTTKVKTEIKTLDHDPIPATEIPAAATV
ADAQAKEIFIHKEIQIVKQIITMEKEISKQVITSTQEKQQSSKPVEDSEAKSSKKQETEQ
TLKARKKGKKTTAALNQDLSPAAEIKTAEVMTAQVPNKDPPSQGPETPVTNSSTKMAPER
MCTKDGSEAAAVETVEAPAYKGEVESAQPSAEKIKREVLKGKTLSSESAREAPTGRASAA
ASAQAGPHPEQGDPPSVAQYSAAPDTQHGGEKQKKLSESEATELHTVHTGPLPTEEIICD
TQALPRDEAAMRRKIVVVEEVIEVQQIASPGADGSPPVQPPVPVTGEELDFDVLEELAQE
RVVLQGSPIQELIWDHSLDEPETKTFPNFIEDERDRVQKKTFTKWVNKHLIKHWRAEAQR
HVSDLYEDLRDGHNLISLLEVLSGETLPREKGRMRFHKLQNVQIALDFLRHRQVKLVNIR
NDDIADGNPKLTLGLIWTIILHFQISDIQVNGQSDDMSAKEKLLLWSQRMVEGYQGMRCD
NFTTSWRDGKLFNAVIHRHEPRLVDMSKVYRQTNLQNLEQAFNVAEKELGVTRLLDPEDV
DVPHPDEKSIITYVSSLYDAMPRETVSGGVRVSELELRWQEYYELVTILLQWIRHHVIIF
EERKFPASFEEIEILWRQFLKFKETELPAKEADKDRSKLVYQSFESAVQAGQIKVPPGYH
PIDVEKEWGRLHVAILERERLLRTEFERLERLQRIVSKVQMESGVCEEQLNHLETLLQSD
IRLLSAGKPAQYTAEVGRDLDKADDMIRLLFNDVQILKDGRHLQAEQMYRRVYRLHERLV
NLRSDYNLRMKSAVVVPPLTSSPSPRARPELDDVTLRYAQDLLAWVEENQRRIETAEWGS
DLPTVESQLGSHRGLHQTVEDFKSKIERARADENQLSPMSKSTYREYLAKLDLQYAKLLN
SSKSRLRNLDQLHAFVNAATKELIWLNDKEEEEVNFDWSDRNTNMTAKKENYSGLMRELE
LREKKVNEIQATGDRLIREGHPGKKTVEAFTAGLQTQWSWILQLCCCIEAHLKENTAYYQ
FFADVKEADEKMKKMQDTMKKKYTCDRSTTSTRLEDLVKDALDEKEQLNEFKTQLAGLNK
RARSIIQLKPRNPTNPIKGKQPVQAVCDFKQMEITVHKGEECALLNNSQPSNWKVLNRSG
AEAIVPSVCFLVPPVNKEAVESVSNLDAGLQQMTTLWQRLHIDMKSLLSWQYLMKDIQII
RSWNITMLKTMKVDEYRQILRNLELHYQDYLRDSQNSQFFKPDDRLQTEKDYKATTQHYE
NLLQAMQKGDQDESVCKTYITQLKDLRLQIEDCESRTVARIRQPVEKDPLKDCITKATDQ
RKVHVELGSIKKNLDKVAEKTEQVLASPEQASTPVLRSELDITLQKMDHTYNLSSVYLEK
LKTIEMVIRNTNGAENILKKYEDRLREVYKVPTDTKEVESYRTELKKMRSEAEEQQPLFV
SLDGDVAKAAAVSERMTQVHRERDTEMDHYKQLLANLQERWRAMFAQIDLRQRELDQLGR
QLGYYRNSYDWLIRWIADAKEEQEKIHAVPITDSKSLKEQLAKEKKLLEEIEKNKEKVDE
CQKYAKAYIDTIKDYELQLVAYKAQVEPLTSPLKKTKMESASDNIIQEYVTLRTRYSELM
TLTSQYIKFITDTQSRLEDEEKAAEKLKAEERKKLAEMQAELDKQKQLAEAHAKASAKAE
KEAEELKLRMQEEVSKREIVAVDAERQKQNIQQEFYELKNLSEQQIKSKSQQVEEALKSR
SKIEEEIRVIRLQLETTVKQKFTAETELKQLRDKAEEAERLRKAAQDEAERLRKQVNEET
QKKRKAEEELELKSEAEREASRQKQKALQDLEDLKMKAEEAERRMKQAEMDKDRQIKLAE
EVATKSAATEIAKKGMLFVEKTSKLEESLKEKQENVIQLQGEAERLKKQQEEADRARDEA
EKELDKWRQKANEALRLRLQAEEEAHKKTLAQEEAEKQKEEAEREAKKRSKAEESALKQK
EMAEHELERQRKLAEGTAQQKLSAEQELIRLRAEFDHAEQQRSLLDDELYRLKNEVNAAV
QQRKQLEDELAKVRSEMDILLQLKSKAEKDSMSNTEKSKQLLEAEAAKMRDLAEEAAKLR
AIAEEAKRQRQVAEEEAARQRAEAERILKEKLAAINEATRLKTEAEIALKEKEAENERLR
RQAEDEAYQRKALEDQASQHKQDIDEKINQLKKSSEVELDRQKAIVDETLKQRRIVEEEI
RILKLNFEKASSGKLDLELELNKLKNIAEETQQSKLRAEEEAEKLRKVALEQENKRKEAE
EKVKKIAAAEQEAARQRQAAQEEVDRLKKKAEEAKKQKEDADKEAERQILAASEAAQKRN
AAEQQVQSILVQQQEDSLVQKKLKDQYEKAKKLAQEAEKGKEKAEKEAALLRQKAEEAER
QRQVAEDEAAHQAKAQEDAERLRKEAELEAAKRAQAEAAALQQKQQADAEMAKHKALAEQ
TLKQKSQVEQELTIVKVQLDETDKQKSLLDDELHRLKNEVSDAVKQKAQVEDELFKVKIQ
MEELMKLKLRIEDENQRLIKKDKDNTQKFLAEEAENMKKLAEEAARLSVESQEAARMRQI
AEADLAQQRALAEKMLKEKMQAIQEASKLRAEAEMLQKQKEMAQEQAQKLLEDKQLMQQR
LDQETEGFQKSLEAERRRQLEITAEAERLRLQVSQLSDAHSKAEEEAKKFKKQANDISSR
LHERELATHEQMTVVEKLEEQRTSSTREAADLRDAIAKIEKEKAKLKKEAEELQKKSKEM
ATAQQEQINQEKTILQQTFISEKEQLLKREKQIEDEKKKLENQYEDEVKKSKALKEEQER
QQKQMEEEKKKLKATMDAALQKQKEAEQEMLNKQKAMQELEKKKLEQERMLAEENQKLRE
KLQQLEVSQKPPPLSQEIQTSDINGSTVTVDGRNGDSTLCFDGIREKVPASRLLEVGLLS
KTDYDKLMKGKITVNELSKREDLKTALKGKNSIGGLLVHPNQKMSIYQAMKAQKIFAGTG
LQLLEAQAASGFLVDPIKNKKLTVTEAVKEGLIGPEYHNKMLSAEKAVTGYEDPYTGAKI
SLFENMKKGLIVKDHAIRLLEAQIATGGIIDAINSHRVSTEIAYKQGQFDEEMNQILQDP
TDDTKAFFDPNTQENLTYLQLMERCIIDPETGLLLLPINEKAQNARTFTDEETRDVFKKT
TVLMPFGRFQGKTVTIWEIINSEYFTEDQRKDLIRQYKTGKITVEKIIKIIITVAEEKEK
KKELEFDGLRAPVPATELLDSKIIDKDLYNKLHQGKKTVQEVSEMETVHKALKGSNCIAG
VVIDSTKETMSFYQAIKNDVMRPEPALALIEAQAASGYIVDPVKNQKFTVDEAVKAGAVG
PELHEKLLSAERAVTGYRDPYTGQTVSLFEAMKKELIGKDQGIRFLDAQLATGGIIDPVK
SHRIPHDIACKRGYFDDETNKLLSNPTDEIKSFYDPNTQEYVTYLQLQKRCITDKKTGLQ
LLSLSEEAIKAKDVQKYNEAQTKEAMTQATVELESGPFKGRKVTIWEIINSDYLTEEQRL
DLIRQYRSGKVTIEKIIKIVITIVDDKESKKQDQSSFQGLRTRVPAKSLFDSKIIDKATY
DSLQQGKTTPNDVSKNNSVNKYLQGSESIAGIFLEPTKEKVSIYQAMKKKLLRQNTGISL
LEAQVATGFIVDPVKKQFLTVDDAVKAGLVGPELHEKLLTAEKAVTGYKDPFTGHNISLF
QAMQKELIPKEHAMPLLEAQISTGGIIDPVNSHRIPTDVAYQKGYFSKEMSSSIAETANV
NKTFSDPETDENVSYKQLKDKCMTDPETGLCLLPLSKPQAPTVVEKTYLYTEEQTQSDLS
STQIDLPIEGLTQGSMSLWDVMNSSLLPEEERTKLLEEYRSGKITKERMIIIIIEIMEQR
EIIRGENVNSCNLVRRRVTVEELYNARIIDLETFNLLKQEKKTIREIMELQGVKQYLFGT
GSVAGVLTDASTRTSVYQAMKRGLMKPENAIGLLEAQAATGFIIDPMKNEMLTVDEAVRK
GVVGPEIHDKLLSAERAVTGYKDPYSGKIISLFQAMKKGLVPEDYALRLLEAQTSTGGII
DPEFHFHLPADIATQRGYINRETYEKLSDEVKGYADPLTEESISYAHMLKRCKVGKDGLF
LLSLSDQKQMVKGLRKLVTIEELIRSEIIDAKTASDLNEGLITIEELSERLKKYLEGTSC
ISGVYVESTKDCLSIYQAMKKNMIRPGTAFELLEAQAATGYIIDPIKNLKLTVSEAVKMG
IVGPEFRDKLLSAERAVTGYRDPYTGKTISLFQAMKKGLILKDHGIRLLEAQIATGGIID
PEESHRLPVEVAYNRGLFDEDMNEILSDPSDDTKGFFDPNTEENLTYLQLMERCITDPQT
GLVLLLLKEKKRERKTSSKSSVRKRRVVIVDPESGKEMSVYEAYRKGLIDHKTYLELAEQ
ECEWEEITMTSSDGEEKSIIIDRRSGRQYDIADALARGLIDQSALDQYRSGNLAITEFAD
MLSGNMSGFRSRSSSFGSTSSYPMSPVPSIRTPATVWNDPTEETGPVAGILDTDTLEKVS
VTEAMHRNLVDNITGQRLLEAQACTGGIIDLSTGEKLPVADALSRGLVDKIMVERINLAQ
KAFNGFEDPRTKAKMSAAQALKKGWLYYEAGQRFLEVQYLTGGLIEPETEGRVSLEEAIK
RSLIDARTAQKLRDVSAYSKYLTCPKTKLKISYKDAMDRSMVEEGTGLRLLEACSSSSKG
LYSPYNVSGAGSATGSRSGSRTGSRSGSRRGSFDATGSGFSMNFSSSSYSSTSYSRRY
Download sequence
Identical sequences XP_007257338.1.101067

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]