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Domain assignment for XP_007646111.1.69978 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_007646111.1.69978
Domain Number 1 Region: 351-449
Classification Level Classification E-value
Superfamily tRNA-intron endonuclease catalytic domain-like 4.88e-26
Family tRNA-intron endonuclease catalytic domain-like 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_007646111.1.69978
Sequence length 479
Comment PREDICTED: tRNA-splicing endonuclease subunit Sen2 isoform X1 [Cricetulus griseus]; AA=GCF_000223135.1; RF=representative genome; TAX=10029; STAX=10029; NAME=Cricetulus griseus; AL=Scaffold; RT=Major
Sequence
MAEAVFRAPKRKRRVYERYESPLPIPFGQDQGPRKEFRIFRAEMISNNVVVRDAEDMEQL
YGKLTAEAFVHSVQDGMRLVICWGYFGKGILSRSRPNFTISNPKLAARWKGVQTDMPIIT
SEKYQHRVEWAMDFMRRQGQEESTVQKILTDYTEPLELPCRKGKEEVPQHDPLNSEANST
LEGRVGKDELSVTTGGAGQSDDLQGLNTHSDCLQEGPGQATLTVASPSSFNGHVIEDTTV
LPQVPCRIAQDGLWPEDSSQAAGEKRAAHEYVLVEEELCDVQEEDEAPDEKLLQRKRLVC
RRNPYRIFEYLQLSLEEAFFLTYALGCLSIYYEKEPLTIAKLWQAFTAVQPTFRTTYMAY
HYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIVELVDDNFEGSLRRPFSWKSLAA
LSRVSGNVSKELMLCYLIKPSTMTSEDMETPECMKRIQVQEVILSRWVSSRERSDQDEL
Download sequence
Identical sequences XP_007621061.1.28591 XP_007621062.1.28591 XP_007646106.1.69978 XP_007646110.1.69978 XP_007646111.1.69978 XP_007646112.1.69978 XP_016824276.1.28591 XP_016824277.1.28591 XP_016824278.1.28591 XP_016824279.1.28591 XP_016824280.1.28591 XP_016824281.1.28591 XP_016824282.1.28591 XP_016824283.1.28591 XP_016824284.1.28591 XP_016824285.1.28591 XP_016824286.1.28591 XP_016824287.1.28591 XP_016833543.1.69978 XP_016833544.1.69978 XP_016833545.1.69978 XP_016833546.1.69978 XP_016833547.1.69978 XP_016833548.1.69978 XP_016833549.1.69978 XP_016833550.1.69978 XP_016833551.1.69978 XP_016833552.1.69978 XP_016833553.1.69978 XP_016833554.1.69978 XP_016833555.1.69978 XP_016833556.1.69978 XP_016833557.1.69978 XP_016833558.1.69978

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