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Domain assignment for XP_007742905.1.26421 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_007742905.1.26421
Domain Number 1 Region: 100-410
Classification Level Classification E-value
Superfamily WD40 repeat-like 9.89e-84
Family WD40-repeat 0.0000000326
Further Details:      
 
Domain Number 2 Region: 4-81
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 7.19e-23
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_007742905.1.26421
Sequence length 457
Comment nuclear distribution protein PAC1 [Cladophialophora psammophila CBS 110553]; AA=GCF_000585535.1; RF=representative genome; TAX=1182543; STAX=1182553; NAME=Cladophialophora psammophila CBS 110553; strain=CBS 110553; AL=Scaffold; RT=Major
Sequence
MSQLLTSRQAEELHKSMVAYLLSIGMTESANTLRREANLADTFDDVTAKKYETLLEKKWT
SVVRLQKKIMDLEAKNVALQQEIETATPLSSNRKIDPQTWLPRAPARHTLQGHRDPVTAV
AFHPIFSSLASASDDSTIKIWDWELGELERTLKGHTKAVLDVDFGGPRGGTLLASCSSDL
TIRLWDPSDEYKNIRTLPGHDHSISSIRFIPSGAAGAPLSGNTLVSASRDKTLRIWDVTT
GYCLKTLKGHTDWVRAVVPSIDGRWLLSAGNDQIPRLWDASSGEVKITFLGHEHVVECVA
FAPSSSYGHLSSIAGYKKPPPASSSGEFLATGGRDKIIKIWDNRGTCHKTLVGHDNWVRG
LVFHPAGRYLISISDDKTIRCWDLSQECKCVKVLDDAHQHFITSIRWAPDLPTQPSLNGE
TNGVATAVKKEDSGGGGKIRCVIATGCVDWNVRVFAG
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Identical sequences W9WYE5
XP_007742905.1.26421

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