SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_008512310.1.77740 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_008512310.1.77740
Domain Number 1 Region: 607-738,805-871
Classification Level Classification E-value
Superfamily Hemopexin-like domain 3.21e-40
Family Hemopexin-like domain 0.0011
Further Details:      
 
Domain Number 2 Region: 27-66
Classification Level Classification E-value
Superfamily Somatomedin B domain 0.000000000641
Family Somatomedin B domain 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_008512310.1.77740
Sequence length 871
Comment PREDICTED: proteoglycan 4 isoform X5 [Equus przewalskii]; AA=GCF_000696695.1; RF=representative genome; TAX=9798; STAX=9798; NAME=Equus przewalskii; AL=Scaffold; RT=Major
Sequence
MEWKILPIYLLLLLSIFSIQEVSSQELSCKGRCFESFARGRECDCDADCKKYGKCCSDYE
SFCEEVKDSKKKRTPKKKPTPEPPVIDEAGSGLDNGDFMLIPTPKIPTTQRNKVTTSPKI
TTVKPINPKPSLPPNSDTSKETTSTPNKETTVETKETEITNKETSTSANEKTTSARKSTE
KTSDKDFAPASEVPAKSTPKAETTTKSPSLTTTKGPAPTTAKGPAPTTTKKPTSTTTEGP
APTTPEEPAPTPPEEPALTTPKKQAPTTTTEPILTTPKEPAPITTKEPALATSKKPPPSP
TPKEPAPTSPETPAPTTSEASTTTTTMKPPTTPKNLAESTPEFPAEPTPKALENSPKEPA
VPTTKAPEVTKPEVTTTAKDKVTGKDIHTIPEITTAAPKITTETATTTEEKTTESKVTST
VMQVTSTTEDTTTSSKITPKATTLAPKVMTATKTTTTQETINKLEETTAIPKDTATHSKV
TTPKPKKPTKAPRKPTSTKKPKTPRKRKPKTTPIPPKITTPTTPKSNPTTLAEAMLQTTT
SPNQTPNSAMIEVNPKNEDADAAEGEKPLVILRPHVLTPIVIPGPDFLVRGPNLGIGINP
MLSDETNLCNGKPVDGLTTLRNGTLVAFRGHYFWMLRPFSPPSPPRRITEVWGIPSPIDT
VFTRCNCEGKTFFFKDSQYWRFTNDIKDAGYPKLISKGFGGLSGKIVAALSIATYKNRPE
SVYFFKRGGRIQQYIYKQEPIRKCPGRRPAIHYSVYGEAPQIRRRRFERAIGPSQTHTIR
IHYSPVRVSYQDKVPSTDFLHNEVKVSTLWRGLPDTVTSAISLPNLRKPDGYDYYAFSKD
QYYNIDVPSRTARAITTRSGQTLSKVWYNCP
Download sequence
Identical sequences XP_008512310.1.77740

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]