SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_008580748.1.73410 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_008580748.1.73410
Domain Number 1 Region: 1695-1941
Classification Level Classification E-value
Superfamily Ankyrin repeat 1.24e-52
Family Ankyrin repeat 0.0000000547
Further Details:      
 
Domain Number 2 Region: 736-866
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000863
Family Growth factor receptor domain 0.012
Further Details:      
 
Domain Number 3 Region: 1049-1183
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000636
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 4 Region: 570-612
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000182
Family EGF-type module 0.0043
Further Details:      
 
Domain Number 5 Region: 407-538
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000188
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 6 Region: 257-387
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000408
Family Growth factor receptor domain 0.0084
Further Details:      
 
Domain Number 7 Region: 1020-1063
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000118
Family EGF-type module 0.005
Further Details:      
 
Domain Number 8 Region: 858-901
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000144
Family EGF-type module 0.0047
Further Details:      
 
Domain Number 9 Region: 900-939
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000268
Family EGF-type module 0.0033
Further Details:      
 
Domain Number 10 Region: 112-153
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000286
Family EGF-type module 0.014
Further Details:      
 
Domain Number 11 Region: 608-641
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000493
Family EGF-type module 0.023
Further Details:      
 
Domain Number 12 Region: 226-269
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000551
Family EGF-type module 0.021
Further Details:      
 
Domain Number 13 Region: 148-185
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000137
Family EGF-type module 0.0049
Further Details:      
 
Domain Number 14 Region: 26-66
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000219
Family EGF-type module 0.0099
Further Details:      
 
Domain Number 15 Region: 529-572
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000062
Family EGF-type module 0.017
Further Details:      
 
Domain Number 16 Region: 1299-1331
Classification Level Classification E-value
Superfamily Notch domain 0.0000000955
Family Notch domain 0.0015
Further Details:      
 
Domain Number 17 Region: 709-747
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000014
Family EGF-type module 0.021
Further Details:      
 
Domain Number 18 Region: 1180-1220
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000172
Family EGF-type module 0.014
Further Details:      
 
Domain Number 19 Region: 939-981
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000182
Family EGF-type module 0.015
Further Details:      
 
Domain Number 20 Region: 1378-1409
Classification Level Classification E-value
Superfamily Notch domain 0.000000327
Family Notch domain 0.0034
Further Details:      
 
Domain Number 21 Region: 1251-1292
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000336
Family EGF-type module 0.0058
Further Details:      
 
Domain Number 22 Region: 992-1029
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000474
Family EGF-type module 0.013
Further Details:      
 
Domain Number 23 Region: 188-230
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000695
Family EGF-type module 0.0093
Further Details:      
 
Domain Number 24 Region: 77-110
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000139
Family EGF-type module 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_008580748.1.73410
Sequence length 2346
Comment PREDICTED: LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 2-like [Galeopterus variegatus]; AA=GCF_000696425.1; RF=representative genome; TAX=482537; STAX=482537; NAME=Galeopterus variegatus; AL=Scaffold; RT=Major
Sequence
MCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNSGTCVAQAMLGKATCLCAPGFTGE
DCQYSTSNPCLVSRGTQGGTCLNGGTCHMLSPDTYECICQVGFTGKLCQWTDACLSHPCA
NGSTCTTVANLFSCKCLSGFTGQKCETDVNECDITGLCQHGGTCLNLPGSYQCQCPQGFT
GQHCDSPYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCEWNIDDCPKHKCQNGGV
CVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDD
CSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGFTGPVCQIDIDDCSSTPCLNGAKC
IDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQ
VDECYSSPCLNDGRCIDLVNGYQCNCQLGTSGVNCEINFDDCANNPCVHGVCMDGINRYS
CVCSPGFTGQRCNIDIDECASNPCRKGATCINDVNGFRCICPEGPHHPSCYSQVNECLSN
PCIHGNCTGGLSGYKCLCDAGWVGINCELDKNECLSNPCQNGGTCDNLVNGYRCTCKKGF
KGHNCQVNIDECASNPCLNQGTCFDDISGYTCHCMLPYTGGSRRCPQGPEXLGLAFSVQA
SPMPGLWSGAAAAVIVSCVQRAGRSMAELTLSWSLGLFLVAGKNCQTVLAPCSPNPCENA
AVCKEAPNFESYTCLCAPGWQGQRCTIDIDECISKPCLNHGLCHNTQGSYMCECPPGFSG
MDCEEDIDDCLANPCQNGGSCVDGVNTFSCLCLPGFVGDKCETDMNECLSEPCKNGGTCS
DYVNSYTCKCQVGFDGVHCENNIDECTDSSCFNSGTCVDGINSFSCLCPVGFTGPFCVHK
IDECNSHPCLNEGTCIDGLGTYRCICSLGYTGKNCQTLVNLCSQSPCKNKGACVQEKAES
RCLCPPGWAGAYCDVPNVSCEVAASRRGVPVDHLCLHSGICISAGNTHHCQCPLGYTGSY
CEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDL
VNHFKCSCPPGTRGLLCEENIDDCARGPRCLNGGQCVDRIGGYTCRCLPGFAGERCEGDI
NECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFMDVCPQMPCLNGGTCAVARNM
PDGFICHCAPGFSGARCQSSCGQVKCRRGEQCVHTASGPRCFCANPPDCESGCASSPCQH
GGSCYPQRQPPYYSCQCAPLFWGSHCEHYTAPTSTTPATCLSQYCADKARDGVCDEACNS
HACQWDGGDCSLTMEDPWANCSSPLPCWDYINNQCDELCNTAECLFDNFECQDNSKTCKY
DRYCADHFKDNHCDQGCNSEECGWDGLDCAADQPENLAEGTLVIVVLMPPEQLLEDARSF
LRALGTLLHTNLNIKRDSQGKPMVYPYYGEKSAAVKKQRMTRRSLPDEQEREVVGSKVFL
EIDNRQCVQDSDQCFKNTDAAAALLASHAIQGTLSYPLVSVVSESLSPKPTQLLYLLAVA
VVIILFIILLGVIMAKRKRKHGSLWLPEGFTLRRDSSNHKRREPVGQDAVGLKNLSVQVS
EANLIGSGTSEHWIDDEGPQPKKAKAEDEALLSEGDDPIDRRPWTQQHLEAADIRRTPSL
ALTPPRAEQEVDVLDVNVRGPDGCTPLMLASLRGGSSDVSDEDEDAEDSSANIITDLVYQ
GASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADANAQDNMGRCPLHAAVAADAQGV
FQILIRNRVTDLDARMNDGTTPLILAARLAVEGMVAELINCQADVNAVDDHGKSALHWAA
AVNNVEATLLLLKNGANRDMQDNKEETPLFLAAREGSYEAAKILLDHFANRDITDHMDRL
PRDVARDRMHHDIVRLLDEYNVTPSPPGSVLTSALSPVICGPNRSFLSLKHTPIGKKPRR
PNAKSTVPTSLPNLAKETKDAKGGRRKKSLSEKVQLSESSVTLSPVDSLESPHTYVSDTT
SSPMITSPGILQASPNPLLATAAPTAPVHAQHALSFSNLHEMQPLAHGASTVLPSVSQLL
SHHHIVPPGSGSAGSLGRLHPVTVPADWMNRIEMNETQYNEMFGMVLAPAEGTHPGIAPQ
SRPPEGKHAATAREPLPPIVTFQLIPKGSVAQPTGAPQPQSNCPPAVAGPLPTMYQIPEM
ARLPSVAFPTAVMPQQDGQGAQTLLPAYHPFPASVGKYPTPPSQHSYASSNAAERTPSHS
GHLQGEHPYLTPSPESPDQWSSSSPHSASDWSDVTTSPTPGGAGGGQRGPGTHMAEPPHS
NMQVYA
Download sequence
Identical sequences XP_008580748.1.73410

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]