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Domain assignment for XP_008835131.1.79516 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_008835131.1.79516
Domain Number 1 Region: 8-168
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 7.59e-59
Family Rap30/74 interaction domains 0.0000000234
Further Details:      
 
Domain Number 2 Region: 447-518
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 5.71e-23
Family C-terminal domain of the rap74 subunit of TFIIF 0.0000399
Further Details:      
 
Domain Number 3 Region: 171-272
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 0.0000732
Family Rap30/74 interaction domains 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_008835131.1.79516
Sequence length 518
Comment PREDICTED: general transcription factor IIF subunit 1 isoform X1 [Nannospalax galili]; AA=GCF_000622305.1; RF=representative genome; TAX=1026970; STAX=1026970; NAME=Nannospalax galili; AL=Scaffold; RT=Major
Sequence
MAALGPGSQNVTEYVVRVPKNTTKKYNIMAFNAADKVNFANWNQARLERDLSNKKIYQEE
EMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKAGRKFKGIKKGGVTE
NTAYYIFTQCPDGAFEAFPVDNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEDEDDKKEKRSRKKSSELRIHDLEDDLEMSSDVSDASGEDGNRALKTKKKTP
LTKAGRKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSPDETEGRPKVPQQEDGPKG
VDEQSESSEESEEEKPPEEDKEEEEERKAPTPQEKKRKKDSSDESDSSEESDIDDSETSS
ALFMAKKKTPPKRERKPSGGSSKGNSRPGTPSAEGGSTSSTLRAAASKLEQGKRTNDTPA
AKRLRMDTAPQNLSGKSTPQPPSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQT
KKTGLSSEQTVNVLAQILKRLNPERKMIGDKMHFSLKE
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Identical sequences XP_008835131.1.79516

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