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Domain assignment for XP_009057416.1.39240 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009057416.1.39240
Domain Number 1 Region: 92-403
Classification Level Classification E-value
Superfamily WD40 repeat-like 9.16e-96
Family WD40-repeat 0.000000000101
Further Details:      
 
Domain Number 2 Region: 2-74
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 4.32e-22
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000489
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_009057416.1.39240
Sequence length 406
Comment hypothetical protein LOTGIDRAFT_217241 [Lottia gigantea]; AA=GCF_000327385.1; RF=representative genome; TAX=225164; STAX=225164; NAME=Lottia gigantea; AL=Scaffold; RT=Major
Sequence
MVLSQRQRDELNKAIADYLSSNGYVSALGEFQKEANITNEIDKKHAGLLEKKWTSVIRLQ
KKVMDLESKLTEAEKEFSIGAPTRDKRSPAEWIPRAPERYALSGHRSPVTKVLFHPVFSV
VISASEDATIKIWDYETGDYERSLKGHTDSIQDIAFDHTGKLLVSCSADMMIKLWDFQGF
ECLKTMFGHDHNVSSVTFMPSGDFIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRV
NKDGSLLASCSNDQTVRVWVVATKECKAELREHEHTVECLAWAPESAYPSIGEASGSDSK
KSPGPFIVSGSRDKTMKMWDVGSGICLFTLVGHDNWVRGVVFHPGGLYLLSASDDKTLRV
WDIKNKRNHKTLEAHSHFTTSVDMHKSSPYVVTGSVDQSVKIWECR
Download sequence
Identical sequences V4A4V2
jgi|Lotgi1|217241|estExt_Genewise1Plus.C_sca_380010 XP_009057416.1.39240

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