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Domain assignment for XP_009351255.1.93535 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009351255.1.93535
Domain Number 1 Region: 54-186
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 3.14e-28
Family Rap30/74 interaction domains 0.00097
Further Details:      
 
Domain Number 2 Region: 476-541
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00000000000000952
Family C-terminal domain of the rap74 subunit of TFIIF 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_009351255.1.93535
Sequence length 546
Comment PREDICTED: transcription initiation factor IIF subunit alpha-like [Pyrus x bretschneideri]; AA=GCF_000315295.1; RF=representative genome; TAX=225117; STAX=225117; NAME=Pyrus x bretschneideri; cultivar=Dangshansuli; AL=Scaffold; RT=Major
Sequence
MSTADLILRPECGGCKTTKDLYGSNCKHLTLCDDCGKKMALNRAKCNECGAVVTRLIREY
NVRASTVNDKNYFIGRFVTGLPSFSKTKNSENKWSLHKDGLQGRQLSDAMREKYKNKPWV
LEDESGRSQYQGHLEGAQTATYYLLIKHPSGKEFSAIPAGSWFNFNKVAQYKQLTLEEAE
EKISNRKKTADGYERWMMKAANNGAALFGEVERFDNDNGVAGGKGRKKTAAGGDDEEGNG
SDRGDEDDEEELERKKRLNKRGGDGDGDDDDEGARGGDADMDDDDIEKGDDWEHEEIFTD
DDEAVGNNPEEREDLEPEIPAPPEIKQDDEDEDEDDKEGGLSKSGKELKKLLGRSGGLND
SDVEDDDDDDDDMDDDIGFPSELAPKQKDAPKEEPSDNSPSKPTPSASSRGTTSTSKSSK
GKRKSSGDDAKASNSAPPKKVKTENEQKSIKEEPVSVPASKSSAPPKGTPPVKTEPSSSG
GRVTEEEIRAVLMQRTPLTTNDLVSRFKGRLKSSEEKAAFSSILRRISKIKKGNNGTSSF
IVLKER
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Identical sequences XP_009351255.1.93535

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