SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_009499201.1.22320 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_009499201.1.22320
Domain Number 1 Region: 179-320
Classification Level Classification E-value
Superfamily DNA-binding protein LAG-1 (CSL) 4.18e-56
Family DNA-binding protein LAG-1 (CSL) 0.00000741
Further Details:      
 
Domain Number 2 Region: 7-166
Classification Level Classification E-value
Superfamily p53-like transcription factors 1.04e-52
Family DNA-binding protein LAG-1 (CSL) 0.0000314
Further Details:      
 
Domain Number 3 Region: 321-433
Classification Level Classification E-value
Superfamily E set domains 2.26e-35
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.00039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_009499201.1.22320
Sequence length 473
Comment PREDICTED: LOW QUALITY PROTEIN: recombining binding protein suppressor of hairless-like protein, partial [Phalacrocorax carbo]; AA=GCF_000708925.1; RF=representative genome; TAX=9209; STAX=9209; NAME=Phalacrocorax carbo; AL=Scaffold; RT=Major
Sequence
SNPYQTNLLRDSVRRYLQVPADQTVLILHAKVAQKSYGNEKRFFCPPPCVYLSGPGWKLK
QEQIKARDLGEEGFRVCGYMGLDSMGSSLMETQKLSFEEQPDAKGFSCAKALYISDADKR
KHXXXXXXXXXXXFCSNGQEIGPFHSKLIKVISKPSQKKQSLKNTDRTYASGPKAPPSTR
LRSQTVSTRYLSVEGGAFIASARQWAAFTLHLADECCTWSEFPLREGYIRYGSVVQLVCT
ATGVTLPPLIIRKVTKQYAMLDVDEPISQLHKCAFQFQGSDRMYLCLSTDKVIQFQASPC
PKEANRELLNDGSCWTIIGTETVEYTFSEGLACVREPVSPVPLITALQLTGGGDVAMLEV
QGEYFHTHLKVWFGDVEAETMYRSAKSLVCVVPDVSAFGSDWRWLRYPITVPLLLIRDDG
LIYSSSFTFTYTPEHNFIPGQQVLSDVPQDSDKLLDSIHQEFTRTNFHLFMQS
Download sequence
Identical sequences XP_009499201.1.22320

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]