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Domain assignment for XP_009658216.1.79873 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009658216.1.79873
Domain Number 1 Region: 100-412,446-459
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.07e-82
Family WD40-repeat 0.0000000721
Further Details:      
 
Domain Number 2 Region: 4-79
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 3.53e-21
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_009658216.1.79873
Sequence length 463
Comment nuclear distribution protein nudF [Verticillium dahliae VdLs.17]; AA=GCF_000150675.1; RF=representative genome; TAX=498257; STAX=27337; NAME=Verticillium dahliae VdLs.17; strain=VdLs.17; AL=Scaffold; RT=Major
Sequence
MSQILTPRQAEELHAIIAYLSSSGLPSTAAALRQELNIGDTFDDATSKKYEGLLEKKWTS
VVRLQKKIMELETRVASLQSEIDNATPTSLSRRNQDPSAWLPRAQARHTLQSHREPVTCV
AFHPVFSSLASGSDDYTIKIWDWELGELERTIKGHTNAVLDVDFGGPRGGTLLASCSNDL
TIKLWDPSDEYKNIRTLPGHDHSVSCVRFIPSGAAGAPSSGNLLVSASRDKTLRIWDVST
GYCLKTLRGHADWVRDVYPSPDGRFLLSVSDDRMGRLWDISAATPETKLTLVGHEHVVLC
CALAPATAYPHLAPLAGLKKAPPASSGTEFMATGGRDKTIRLWDGRGNCIKVLVGHDNWV
RDLVFHPGGKYLISASDDYTLRCWDLTQEGKCVRTVQGVHGHFVSCLRWAPSIIREDASA
NGSGENGANGTPSKSAAAPATTEQIRCVIATGSVDMKVRVFAN
Download sequence
Identical sequences G2XJ86
XP_009658216.1.79873 VDAG_10218T0

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