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Domain assignment for XP_009892663.1.48241 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009892663.1.48241
Domain Number 1 Region: 180-303
Classification Level Classification E-value
Superfamily Dystroglycan, domain 2 1.57e-59
Family Dystroglycan, domain 2 0.000000602
Further Details:      
 
Domain Number 2 Region: 497-599
Classification Level Classification E-value
Superfamily Cadherin-like 4.39e-17
Family Dystroglycan, N-terminal domain 0.037
Further Details:      
 
Domain Number 3 Region: 61-159
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000000188
Family Dystroglycan, N-terminal domain 0.0000166
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_009892663.1.48241
Sequence length 895
Comment PREDICTED: dystroglycan [Charadrius vociferus]; AA=GCF_000708025.1; RF=representative genome; TAX=50402; STAX=50402; NAME=Charadrius vociferus; AL=Scaffold; RT=Major
Sequence
MTVGCLLQPPFLGRTWLPVLLLAASAHCHWPSEPAEVVRDWENQLEASMHSILSDLRETV
PAVVGIPDSSAVVGRFFRVSIPTDLIASNGEIVQISEAGKDSLPSWLHWNAESSSLEGLP
LDTDKGVHYISVTTLQPFPNGSYVPQTANVFSVEVHQEDHNEPQSVRVAGXXXXXXXXXC
GSKEPVTILTVILDADLTKMTPKQRIELLNRMRSFSEVELHNMKLVPVVNNRLFDMSAFM
AGPGNAKKVVENGALLSWKLGCSLSQNSVPNISKVEAPAKEGTMSARLGYPVVGWHIANK
KPHLPKRMRRQINATPTPLTAIGPPTTAAQEPPTRIVPTPTSPAIAPPTETTAPPVREPI
PLPRKPTVTIRTRGPIVQTPTLGPIQPTRVAEGTGTASVPIRPTMPGYVEPTAVITPPTT
TTKKPRVSTLKPATPSTTDSSTATTRRPTRRPKTPRPTKPPSTTRSPISKLTTASPPTRL
RTTASGIPRPWEPNEPPKLTNHIDRVDAWEGTYFEVKIPSDTFYDKEDTTTDKLQLTLKL
KEQQMIEENSWVQFNSTSQLMYGMPDHNHIGKHEYFMYATDKGGLFAVDAFEIHVHKRPH
GDKSPVKFKARLEGDHNAVVNDINKKIMLVKKLALAFGDRNSSTITVQDISKGSIVVEWT
NNTLPLEPCPREQIRTLSKKIADDSGGPSLAFSNVLQPEFKPLNVSVVGSGSCRHIQFIP
VTKDGRVISEATPTVVAGKDPEKSSEDDVYLHTVIPAVVVAAILLVAGIIAMICYRKKRK
GKLTIEDQATFIKKGVPIIFADELDDSKPPPSSSMPLILQEEKAPLPPPEYPNQNMPETT
PLNQDTIGEYTPLRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP
Download sequence
Identical sequences XP_009892663.1.48241

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