SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_010076755.1.40768 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_010076755.1.40768
Domain Number 1 Region: 250-412
Classification Level Classification E-value
Superfamily TRAF domain-like 1.18e-35
Family MATH domain 0.000000241
Further Details:      
 
Domain Number 2 Region: 213-249
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.00000000000012
Family Trimerization domain of TRAF 0.00067
Further Details:      
 
Domain Number 3 Region: 68-121
Classification Level Classification E-value
Superfamily TRAF domain-like 0.00000085
Family SIAH, seven in absentia homolog 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_010076755.1.40768
Sequence length 414
Comment PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 2-like, partial [Pterocles gutturalis]; AA=GCF_000699245.1; RF=representative genome; TAX=240206; STAX=240206; NAME=Pterocles gutturalis; AL=Scaffold; RT=Major
Sequence
ALQRAALAVAELLGGERPVAAGCAWAVRGRSWERLERNLHCRRCRWLLCFPDTEAHDEVC
PEFPLTCEGCGKKIPREKFRDHVKSCGRSKVPCRFEVVGCAEVVENEKLPEHESKCLAEH
LYMLLSFVLSLKAGSGDLKPLPALPSSQNNSPLLGANSLCSEPEVSRSLELLGRCEALER
KTVTFENIVCVLNREVERGSLTAEAXXXXXXXKIETLSNKVRQLERSIGLKDLAMAEMEE
KIRNMEASTYDGVFIWKITDFARKRQEAITGRSPAIFSPGYCTQIHKIAKAFCISAGHGI
CSGVLSRGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRPD
VTSSSFQRPVTEMNIASLAAGLPLFCPVSLMEAKNSYVRDDAIFIKAIVDLTGL
Download sequence
Identical sequences XP_010076755.1.40768

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]