SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_011791668.1.43180 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_011791668.1.43180
Domain Number 1 Region: 96-365
Classification Level Classification E-value
Superfamily EndoU-like 6.41e-96
Family Eukaryotic EndoU ribonuclease 0.0000064
Further Details:      
 
Domain Number 2 Region: 47-87
Classification Level Classification E-value
Superfamily Somatomedin B domain 0.000000000301
Family Somatomedin B domain 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_011791668.1.43180
Sequence length 370
Comment PREDICTED: poly(U)-specific endoribonuclease isoform X2 [Colobus angolensis palliatus]; AA=GCF_000951035.1; RF=representative genome; TAX=336983; STAX=54131; NAME=Colobus angolensis palliatus; AL=Scaffold; RT=Major
Sequence
MRACIPLVLAVLCGLAWAEDHKESEPLPQPEEETEEALASNLYSAPTSCQGRCYEAFDKH
HQCHCNARCQEFGNCCKDFESLCSDHEGFSHSSDAITKEEIQSISEKIYRADTNKAQKED
IILNSQNCISPSETRDQRDRCPKPLFTYVNEKLFSKPTYAAFINLLNNYQRATGHGEHFS
AQELAEQDAFLREIMKTAVMKELYSFLHHQNRYGSKQEFIDDLKNMWFGLYSRGNEEGDS
SGFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPDVLAMQFTWDG
YYKEVGSAFIGSSPEFEFALYSLCFIARPGKVCPLSLGGYPLAVRTYTWDKSTYGNGKKY
IATAYIVSSA
Download sequence
Identical sequences A0A2K5I677
XP_011791668.1.43180

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]