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Domain assignment for XP_012016390.1.54773 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012016390.1.54773
Domain Number 1 Region: 366-514
Classification Level Classification E-value
Superfamily TRAF domain-like 8.34e-52
Family MATH domain 0.0000000869
Further Details:      
 
Domain Number 2 Region: 326-364
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.000000000000706
Family Trimerization domain of TRAF 0.0003
Further Details:      
 
Domain Number 3 Region: 26-74
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000033
Family RING finger domain, C3HC4 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_012016390.1.54773
Sequence length 516
Comment PREDICTED: TNF receptor-associated factor 2 isoform X2 [Ovis aries musimon]; AA=GCF_000765115.1; RF=na; TAX=9938; STAX=9940; NAME=Ovis aries musimon; AL=Scaffold; RT=Major
Sequence
MAAASVTPPGSLDLLQPGFSKTLLGTKLEDKYLCSACKNVLRRPFQAQCGHRYCSFCLSS
ILSSGPQSCAACVHEGIYEEGVSILESSSAFPDNAARREVESLPAVCPSEGCSWKGTLKD
YESCHEGHCPFMLTECPACKGLVRLGEKEHHLEHQCPERSLSCRHCRAPCCPADMKAHHQ
TCPKFPLTCDGCGKKKIAREKFQDHVRACGRCRVPCRFHAVGCPEMVESEQQQEHEAQRL
QEHLALLLGALLGAARPPGDGHPLLGQAEGAWEASTPSRVAELLQRCEALERKTATFENI
VCVLNREVERVAVTAEACGRQHRLDQDRIEALSNKVQQLERSIGLKDLAMADLEQKVLEM
EASTFDGVFVWKISDFSRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGT
HLSLFFVLMRGPHDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVTDMNI
ASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL
Download sequence
Identical sequences XP_012016390.1.54773 XP_012016391.1.54773 XP_012016392.1.54773 XP_012016393.1.54773

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