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Domain assignment for XP_012275537.1.87881 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012275537.1.87881
Domain Number 1 Region: 167-289
Classification Level Classification E-value
Superfamily Dystroglycan, domain 2 1.96e-35
Family Dystroglycan, domain 2 0.001
Further Details:      
 
Domain Number 2 Region: 749-850
Classification Level Classification E-value
Superfamily Cadherin-like 7.22e-17
Family Dystroglycan, N-terminal domain 0.028
Further Details:      
 
Domain Number 3 Region: 511-607
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000000314
Family Dystroglycan, N-terminal domain 0.056
Further Details:      
 
Domain Number 4 Region: 66-155
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000000832
Family Dystroglycan, N-terminal domain 0.0033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_012275537.1.87881
Sequence length 1133
Comment PREDICTED: dystroglycan-like isoform X2 [Orussus abietinus]; AA=GCF_000612105.1; RF=representative genome; TAX=222816; STAX=222816; NAME=Orussus abietinus; AL=Scaffold; RT=Major
Sequence
MKPLCLLAFLLVPLVLGVTLQEDDLVFDDVGEETSPVTVHEGHRDHRKDREKIRDAKKHR
VERLWGVPGAVVAVGHVLKIKIPKQAFGGNVDHYEVRGSNGKELSSWMFWDEAASTLVGV
PSRKDLGQHHVAVKAFGKHGDAARDTFTVRVVPEEHNEVLHKDGKTHCEEDKDQTLLTIL
LDARFESLKPPTRVNAVENLAGFLGMHTSAFSIHPYEPKEVSSVVFAGLGNVKHRREKHI
TAIQWQVGCNGGLWRHQSDLVKQLREQAKDGTLTEVLQLPVFVWCVRTHANTLARNRREI
GSGDFGNADDIEYDGDYGDGDYDDDDEEDDDVDEETFTESPLEHVPKAPGGRENTETKPE
HPHRHHHGEQTIDFGNDEIDQTEIVAKMNENVDAIPTTTRSSSSSTTVESTTMPEVKEPT
TPPVTTSVATTTPSTTTSTTTMSTTSTTTTTTEMPSTVPSTPITSPSTTTTTTTTTQPTT
TSTTTPPPPPTIPTTEKIEYGVHNFPPRQDKRLQKIAVTAGKPLNYTIPADTFTDLEDGN
TRKLALSLYLDHSPIKHTHWLQFNRRSQKIYGLPLEKDISSWDYELVAADSEGLNVSDRL
DIHVQQHKLSRTVNHEFSIYLRILRRSEFPTNVDWELKVIQRLAELYGDSDISQITVRSI
ELDHDQAIFTWTNDTIPRGSECPRDQINKLLHVLVANRHNEPSVALQEALAPEFQVKRVV
YQGIGQCEEVSRPDSPKTPTQEPKTNFPPIPRNQVDHINATVGQLLIFRVPEDTFFDPED
GSARNMKMSLLTIDRTPIPPHEWLQFDGKNQEFYGVPLHKDVGRKEYQLIVTDKGGVSAT
DGLVVVVHPAPVMHHNVEFSMTLAIPYDSFAHSALQKRNFIERLRDLFKDKDTGAISLDS
ISRGSTVVTWHNRTLPTNTCPNDQIVKLHKVLVKDDKTLSDRVEEVMSPDFPVMQITLTP
MRICLGELTGIHSPDSYVPPVDDSTSLGASHDDYLITFVLPAIIISAMLILAAIIACVLY
RRRRSGKMSVSEQDDERQSFRNKGIPVIFQDELDEKPDPGNKSPIILKEEKPPLPPPEYQ
KAEDGADVPMLPKENSEEPYQPPPPFATSRDNNRQNRPKPTPTYRKPPPYVPP
Download sequence
Identical sequences XP_012275537.1.87881

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