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Domain assignment for XP_012589394.1.23501 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012589394.1.23501
Domain Number 1 Region: 1492-1595
Classification Level Classification E-value
Superfamily Bromodomain 2.35e-33
Family Bromodomain 0.000000843
Further Details:      
 
Domain Number 2 Region: 1339-1470
Classification Level Classification E-value
Superfamily Bromodomain 8.63e-32
Family Bromodomain 0.000000137
Further Details:      
 
Domain Number 3 Region: 10-66
Classification Level Classification E-value
Superfamily TAF(II)230 TBP-binding fragment 7.59e-18
Family TAF(II)230 TBP-binding fragment 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012589394.1.23501
Sequence length 1852
Comment PREDICTED: transcription initiation factor TFIID subunit 1 isoform X8 [Condylura cristata]; AA=GCF_000260355.1; RF=representative genome; TAX=143302; STAX=143302; NAME=Condylura cristata; AL=Scaffold; RT=Major
Sequence
MSDTDSDEDSAGGGPFSLAGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITE
LTANEELTDGALVNDEGWIRSTEDAVDYSDINEVAEDESRRYQQTMGSLQPLCHSDYDED
DYDADCEDIDCKLMPPPPPPPGPMKKDKDQDAITGEKVDYSSSSDSESEMGPQEATQAES
EDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKR
KKKHRELIQEEQMQEVECLVESEVDQKSLWNYDYAPPPPPEQCLSDDEITMMAPVESKFS
QSSGDIDKVTDTKPRVAEWRYGPARLWYDMLGVPEDGSGFDYGFKLRKLEHEPLMKCRMM
EEFRKLEESNGSDLLADENFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMT
RNAMAYNVQQGFAATLDDDKPWYSIFPIDNEELVYGRWEDNIIWDAQAMPRLLEPPVLTL
DPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVK
DPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKK
YSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAE
YSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQA
FENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTH
IRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWW
VLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMK
IDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQ
PVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEG
PMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGK
NIENMLQNKKTSSQLSREREEQERKELQRMLLAAGSAAAGNNHRDDDTASVTSLNSSATG
RCLKIYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRK
ERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLY
YQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLV
LKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNT
YPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGP
KHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAV
PDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKY
NGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPY
TPQAKPPDLYDTNTSLSMSRDASVFQDESNMSVLDIPSATPEKQVTQEGEDADGDLADEE
EGTVQQPQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVGSGGIRPK
QPRMLQENTRMGMENEESMMSYEGDGGEASHGLEDSNISYGSYEEPDPKSNTQDTSFSSI
GGYEVSEEEEDEEEEEQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
Download sequence
Identical sequences XP_012589394.1.23501

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