SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_013036563.1.65836 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_013036563.1.65836
Domain Number 1 Region: 158-315
Classification Level Classification E-value
Superfamily DNA-binding protein LAG-1 (CSL) 2.22e-67
Family DNA-binding protein LAG-1 (CSL) 0.000000856
Further Details:      
 
Domain Number 2 Region: 12-160
Classification Level Classification E-value
Superfamily p53-like transcription factors 3.98e-66
Family DNA-binding protein LAG-1 (CSL) 0.0000109
Further Details:      
 
Domain Number 3 Region: 316-428
Classification Level Classification E-value
Superfamily E set domains 1.49e-41
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.00011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_013036563.1.65836
Sequence length 482
Comment PREDICTED: recombining binding protein suppressor of hairless isoform X3 [Anser cygnoides domesticus]; AA=GCF_000971095.1; RF=representative genome; TAX=381198; STAX=8845; NAME=Anser cygnoides domesticus; breed=Zhedong; AL=Scaffold; RT=Major
Sequence
MKKFGERPQPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGS
GWKKKKEQMERDGCTEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDSDKRKH
FMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTV
STRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMA
LPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN
KEMINDGASWTIISTDKAEYTFYEGMGPVHAPVTPVPVVESLQLNGGGDVAMLELTGQNF
TPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYST
SLTFTYTPEPGPRPHCSAAGAILRANSSLMASSETTANSEGSYTNVSTNPTNVTSSTATV
VS
Download sequence
Identical sequences XP_005019312.1.99704 XP_013036563.1.65836

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]