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Domain assignment for XP_013053709.1.65836 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013053709.1.65836
Domain Number 1 Region: 413-563
Classification Level Classification E-value
Superfamily TRAF domain-like 1.16e-50
Family MATH domain 0.0000000378
Further Details:      
 
Domain Number 2 Region: 363-412
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 8.11e-20
Family Trimerization domain of TRAF 0.00013
Further Details:      
 
Domain Number 3 Region: 111-210
Classification Level Classification E-value
Superfamily TRAF domain-like 4.18e-19
Family SIAH, seven in absentia homolog 0.0095
Further Details:      
 
Domain Number 4 Region: 42-98
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000353
Family RING finger domain, C3HC4 0.01
Further Details:      
 
Domain Number 5 Region: 210-252
Classification Level Classification E-value
Superfamily TRAF domain-like 0.000000288
Family SIAH, seven in absentia homolog 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_013053709.1.65836
Sequence length 567
Comment PREDICTED: TNF receptor-associated factor 3 isoform X1 [Anser cygnoides domesticus]; AA=GCF_000971095.1; RF=representative genome; TAX=381198; STAX=8845; NAME=Anser cygnoides domesticus; breed=Zhedong; AL=Scaffold; RT=Major
Sequence
MDASKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNVLLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELACPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLNRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
Download sequence
Identical sequences XP_013053699.1.65836 XP_013053700.1.65836 XP_013053701.1.65836 XP_013053702.1.65836 XP_013053703.1.65836 XP_013053704.1.65836 XP_013053705.1.65836 XP_013053706.1.65836 XP_013053708.1.65836 XP_013053709.1.65836

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