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Domain assignment for XP_013120557.1.78416 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013120557.1.78416
Domain Number 1 Region: 1432-1562
Classification Level Classification E-value
Superfamily Bromodomain 3.27e-32
Family Bromodomain 0.000000314
Further Details:      
 
Domain Number 2 Region: 1577-1689
Classification Level Classification E-value
Superfamily Bromodomain 1.44e-31
Family Bromodomain 0.00000486
Further Details:      
 
Domain Number 3 Region: 7-64
Classification Level Classification E-value
Superfamily TAF(II)230 TBP-binding fragment 1.83e-19
Family TAF(II)230 TBP-binding fragment 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_013120557.1.78416
Sequence length 1953
Comment PREDICTED: transcription initiation factor TFIID subunit 1 isoform X6 [Oreochromis niloticus]; AA=GCF_001858045.1; RF=representative genome; TAX=8128; STAX=8128; NAME=Oreochromis niloticus; AL=Chromosome; RT=Major
Sequence
MSDSDSDDDQDRPFSITGFLFGNINEDGQLEDDSVLDNESKKHLAGLGTLGLGSLITEIT
ANEDDDKEENRDPANVDAEGWVKSTEDAVDYSDISEVAEDETKKYRQAMGSLQPSRKTDD
EDDYDADCEDIDSKLMPPPPPPTLPTSKKEEPSTQSTNAVGEDGDGIILPSIIAPSSTAD
KIDFSSSSDSESETDRPCQGSGAGGSADILTLPLAGIMQKDAAKALPGVTELFPEFRPGK
VLRFLRLFGPGKNVPSVWRSARRKKKRKHRDHQPGTPPPEGEPSEQSQEKKSGWVYEYAL
PPPPEQCLSDDEITMMAPVESKFSQTSGDGDKETESRPKVAEWRYGPAQLWYDMLGVSED
GSNFNYGFKLKELQSSEPQKQDTPNEITETSQEVQMQEDNDIVDGDDDDDDEDKDRKALE
NELFLMVTQLQWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLTRSN
SQLVPPTPPPMPKAASISGSKRDKNSHDNQASQDEDCLWFSIFPIDNEELVYGRWEDNII
WDDQEMDHMLEPPVLTLDPNDENIILEIPDEKEETTSHSPSKENKKETAIKKSRILLGKT
GVIKDEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALELRQPFFPT
HMGPMKLRQFHRPALKKYSFGAVAQPGPHPAQPLLKHIKKKAKMREQERQASGGGDMFFM
RTPQDLTGKDGDLILAEYSEEYAPLIMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYC
HTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVIRTRHGYYIREIVDIFVVGQE
CPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKR
LKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGE
KSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADPTGCGEGFSY
VKVPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEV
IDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLST
DTDSSSAEDSDFDEMGRNIENMLQNKKTSTQLSREREEQERKELQRMLMGEESDRDKGRK
ERRKGISSSLSTSSHKDDDTSSVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKAAV
IDAYTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKIKGPPEKK
TKKVKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHN
DNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGSAVHCDYLNKP
HKAIHRRRTDPMVTLSSVLESIINDMRDHPNTYPFHTPVNAKVVKDYYKIITRPMDLQTL
RENVRKRMYPSREEFREAVELIVKNSATYNGAKHPITQVAQSMLDLCDAKLKEKEDRLVR
LEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPESWPFHHPVNKKFVPDYYKVIVNPMDL
ESIRKNISKHKYQNRETFLSDVSLIHTNSIKYNGSDSPYTKTALEIVNVCKQTLAEYDEH
LTQLEKDISTAKEAALDAADLESLEPMTPGPYTPQGRHSRRPGEEESDVDIEGFDEDDDG
KPKTPAPAEDAEGDQEYEDDDEELLLPPRRRVHDQDDEEEEEEEEGDGRSNRPAQASVLY
QDLLMSDVEDDASEEEGDNPFSSIQLSESGSDSDREVDVRPAPPRRTQETARMGMEQDES
MMSYEGDGPDGPHMEDSNVSYGSYEETESQSQMQPSSLGNGEEYGISEEEEEDEEDEARR
RGPAVLSQVQLSEDEESEEFRSIGGDSDMDSDN
Download sequence
Identical sequences XP_013120557.1.78416

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