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Domain assignment for XP_015250226.1.42780 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015250226.1.42780
Domain Number 1 Region: 29-513
Classification Level Classification E-value
Superfamily Sema domain 1.31e-101
Family Sema domain 0.00091
Further Details:      
 
Domain Number 2 Region: 1384-1509,1675-1861
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 1.88e-34
Family p120GAP domain-like 0.025
Further Details:      
 
Domain Number 3 Region: 855-946
Classification Level Classification E-value
Superfamily E set domains 0.0000000000000675
Family Other IPT/TIG domains 0.011
Further Details:      
 
Domain Number 4 Region: 1038-1118
Classification Level Classification E-value
Superfamily E set domains 0.00000000000101
Family E-set domains of sugar-utilizing enzymes 0.024
Further Details:      
 
Domain Number 5 Region: 946-1036
Classification Level Classification E-value
Superfamily E set domains 0.0000000000789
Family Other IPT/TIG domains 0.059
Further Details:      
 
Domain Number 6 Region: 516-568
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000349
Family Plexin repeat 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_015250226.1.42780
Sequence length 1899
Comment PREDICTED: plexin-D1 isoform X1 [Cyprinodon variegatus]; AA=GCF_000732505.1; RF=representative genome; TAX=28743; STAX=28743; NAME=Cyprinodon variegatus; AL=Scaffold; RT=Major
Sequence
MPPSMEIAVLLLGVLALETRRSASALHIQQAFSSPNLTNNFVVDPVSGKVYLATVNTVYQ
LNGTLSVEVEKSTGPVEDNLLCHAPQLPQAPCEHPKSLTDNYNKLLKLDRDQGVVVVCGS
VYQGFCELRRMGNISEIAVEFPPRGEKTVFPSMLNIAANHPNASTVGLIFKSHGGNTRLL
VGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNTQDLSRLFTYDINPSEDNVFKIKQ
EVKTKNKLNFVHAFIQKTYSYIAFNNDAKMGHKESQPNSILARICLDSDSPRKSTGPESR
KLTESYIQMPLQCGSNGNIYNRLLSVYPATVPAEGGRDPQPYLFGVFSKADAKSALCAFK
FGDIEEEIRQGRRNCSNSPSSDVQVLDSVIQGSGAVCVQKGNLVLQPEQLDCGAAHLQHP
LALRRPLRATPLFEYSSLSSVSVDSVHQHTVVFLGTSNGRLHKLTFLPNRTLASQRTTKL
PAAEAVHHIMTFDPNNSNFLYVMTSHHMLRVKVAECDLWTSCTDCLGAGDAYCGWCTLEN
RCSIQNECARGLMPRSWISIGQGPQQCPSITLTPSEISISAKIEAVGILINGSIPDLIGS
KVECEYKPGVSTVATVYGLSQIQTCPLLPRENYQPIPPGTDHLAVSVAIKVNGTSVVSGS
FIIYDCEKTGQIHPNTPCMSCLSTGWKCYWDQENHLCLSSKDESKLNLLESAASCPSLIP
SDAPPSPSGMAQDFTMNLKNIQKRESLECDFGTESRYEAIWLDNSTVKCSGVTLFTNQRS
QIYHLSLRRAGDFSSQRKDIFLDSPQPMKVEVYNCGAGSSDCSQCWGREDQGHLCGWCEN
SCRPRDDCQPITDVCPAPEINKISPLRGPVEGGTLLTVQGRNLGRRPSELKVSIGDVPCE
LLPERYTVSVELVCRTGRSEHDRTDSVRVEVDQSGMGMSKESFAYLVPSVHFIDPKNGSS
AGGTRVTIHGKHLDIGSQVRVKVNKTQECTITEKTDQMIKCIMPPTLEVDSEPVTVCVEF
EDHPCQEMELSEMYTYEKNPTISSIHPTKSFLSGGRTITVKGQGFNLVQSVIMHVLEIGQ
TNCTVQSTSTIICLSPESSQSQETSVQFILNGVRYTGDSPSFSDDRTVENDRENHKEHFQ
LGYVEDPQFFTANKEKQIKHHSGEPLTLIINQKVPSELELVPEEYLVMIGSYPCNISFHN
DQLFHCTINGQLSSSESELPVTVQVGNFRHMITKVQLGGSEMAIVVSIVVCCVLLLLCTV
ALVVYCTKSRRAERYWQKTLLQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQGIPF
LEYKQFVTRTFFPKMCSDYENSLVRHNYENDSLGPRALPETHPLLQDWQVKANNTTQPNV
EEGITLFSTLLNNKHFLITFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKDL
LVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMFSYLKETVGEPFFLLLCAIKQQIN
KGSIDVLTGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLSVRVMNTDTICQVKEK
IIEAFYKNLPFSQWPRAEDVDLEWFDSGSNSKLLQDLDNSSVMEDGRKKLNTVFHYQIPE
GASLAMSMKDKKECTLERVKDLDTEKYVHLVLPHDELIETKKSHRHSHRKKVLPEIYLTR
LLSTKGTLQKFLDDLFLAILSIPPDRPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTNS
LPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAK
EIPEYKKRVQCYYKQIQEMPPLSEQEMNAHLAEESRKYRNEFNTHLALTEIYKYAKRYRN
QVVNALEANPTARRTQLHHKFEQVIALVEDNIYECCSEA
Download sequence
Identical sequences XP_015250226.1.42780

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