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Domain assignment for XP_015361207.1.40921 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015361207.1.40921
Domain Number 1 Region: 350-499
Classification Level Classification E-value
Superfamily TRAF domain-like 2.78e-52
Family MATH domain 0.0000000579
Further Details:      
 
Domain Number 2 Region: 311-349
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.000000000000497
Family Trimerization domain of TRAF 0.0003
Further Details:      
 
Domain Number 3 Region: 27-74
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000542
Family RING finger domain, C3HC4 0.014
Further Details:      
 
Domain Number 4 Region: 103-161
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0000248
Family SIAH, seven in absentia homolog 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_015361207.1.40921
Sequence length 501
Comment PREDICTED: TNF receptor-associated factor 2 isoform X1 [Marmota marmota marmota]; AA=GCF_001458135.1; RF=representative genome; TAX=9994; STAX=9993; NAME=Marmota marmota marmota; AL=Scaffold; RT=Major
Sequence
MAAASVTPPGSLDLLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLTS
ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKE
YESCHEGLCPFLLTECPACKGLVRLGEKERHAEQECPERNLNCQHCQEPCGHADLEAHHE
VCPKFPLTCEGCGKKKIPREKFHDHVRTCGKCQVPCRFHSVGCPEMMEAEELLEHEAHQL
REHLALVLSSLLEAQTLPGGQNQVGPQLLQRCQTLEQKTATFENIVCVLNREVERVAVTA
EACSRQHRLDQDKIEALSNKVQQLERSIGLKDLAMADLEQKVLELEASTYDGVFIWKISD
FARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDA
LLRWPFNQKVTLMLLDQNNREHVIDAFRPDITSSSFQRPVSDMNIASGCPLFCPVSKMEA
KNSYVRDDAIFIKAIVDLTGL
Download sequence
Identical sequences XP_015361206.1.40921 XP_015361207.1.40921 XP_015361208.1.40921 XP_015361209.1.40921

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