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Domain assignment for XP_015855111.1.50099 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015855111.1.50099
Domain Number 1 Region: 1500-1603
Classification Level Classification E-value
Superfamily Bromodomain 2.35e-33
Family Bromodomain 0.000000843
Further Details:      
 
Domain Number 2 Region: 1347-1478
Classification Level Classification E-value
Superfamily Bromodomain 8.63e-32
Family Bromodomain 0.000000137
Further Details:      
 
Domain Number 3 Region: 10-66
Classification Level Classification E-value
Superfamily TAF(II)230 TBP-binding fragment 3.66e-18
Family TAF(II)230 TBP-binding fragment 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015855111.1.50099
Sequence length 1858
Comment PREDICTED: transcription initiation factor TFIID subunit 1 isoform X6 [Peromyscus maniculatus bairdii]; AA=GCF_000500345.1; RF=representative genome; TAX=230844; STAX=10042; NAME=Peromyscus maniculatus bairdii; AL=Scaffold; RT=Major
Sequence
MSDTDSDEDSAGGGPFSLTGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITE
LTANEELTETDGALLNDEGWIRSREDAVDYSDINEVAEDESRRYQQSMGSLQPLCHSGDY
DEDDYDADCEDIDCKLMPPPPPPPGPVKKEKDQDGITGGYQVQEKVDFSSSSDSESEMGP
QEATQAESKDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSV
WRSARRKRKKKHRELIQEEPMLEEECSAEQEVNQKSLWNYDYAPPPPPEQCLSDDEITMM
APVESKFSQATGDTDKVMDTKPRVAEWRYGPARLWYDMLGVPEDGSGFDYGFKMRKTEHD
PTVQCKMMTKLRNLEEGNGIDLLADENFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLA
GWLPSSMTRNAMAYNVQQGFAATLDDDKPWYSIFPIDNEDLVYGRWEDNIIWDAQAMPRI
LEPPVLTLDPNDENLILEIPDEKEEATSNSPSKENKKESSLKKSRILLGKTGVIKEEPQQ
NMSQPEVKDPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQ
FHRPPLKKYSFGTLSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGK
DGDLILAEYSEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSL
HPGQLLQAFENNLFRAPIYLHKMPETDFLMIRTRQGYYIRELVDIFVVGQQCPLFEVPGP
NSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKR
TGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEE
NEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQ
QKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMST
EQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAED
SDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAAGSAAAGNNHRDDDTASVT
SLNSSATGRCLKIYRTFRDEEGKEYVRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDE
QHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMR
TNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESAD
EVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIIN
DMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVK
NSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNI
VTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNL
ILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESL
DPMTPGPYTPQAKPPDLYDNSTSLSVSRDASVYQDESNMSVLDIPSATSEKQLTQEGEDG
DGDLADEEEGTVQQTQASVLYEDLLMSEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDV
GSGSIRPKHPRVLQENTRMGMENEESMMSYEGDGGEASRGLEDSNISYGSYEEPDPKSNT
QDTSFSSIGGYEVSEEEEDEEEQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
Download sequence
Identical sequences XP_015855111.1.50099

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