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Domain assignment for XP_015861266.1.50099 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015861266.1.50099
Domain Number 1 Region: 2265-2455
Classification Level Classification E-value
Superfamily BRCA2 helical domain 3.14e-83
Family BRCA2 helical domain 0.0000000127
Further Details:      
 
Domain Number 2 Region: 2619-2754
Classification Level Classification E-value
Superfamily BRCA2 tower domain 1.7e-54
Family BRCA2 tower domain 0.000000742
Further Details:      
 
Domain Number 3 Region: 2838-2969
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.48e-46
Family Single strand DNA-binding domain, SSB 0.00000183
Further Details:      
 
Domain Number 4 Region: 2457-2589
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 5.91e-43
Family Single strand DNA-binding domain, SSB 0.000000454
Further Details:      
 
Domain Number 5 Region: 2590-2619,2755-2837
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.2e-34
Family Single strand DNA-binding domain, SSB 0.0000121
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015861266.1.50099
Sequence length 3200
Comment PREDICTED: breast cancer type 2 susceptibility protein isoform X5 [Peromyscus maniculatus bairdii]; AA=GCF_000500345.1; RF=representative genome; TAX=230844; STAX=10042; NAME=Peromyscus maniculatus bairdii; AL=Scaffold; RT=Major
Sequence
MSWSSSLATPPTLTSTVLIARDEEARGTVFPEDSPAQVLKSYFSNRNESLKKNDRSVPSD
SQNKTQGEAFSHRLGKMLGDSSGKTNSFKDCLRKSVPNVLEDGEAAAYTSEEDSFSLCFP
KHRTRKLQKMRLGKTRKNIFSEVGTDELSEEARRRAEETQPFALEIEPRDSDPLAPNVTQ
QKPSDSPSEERCQAPVQPPDSGWSQLALSGLTATQPGENPPLPISSCNQSSSEKDFTDMK
KEGIGSFTSENSLPPISNFPEPEKMFSEKTLGGEEHGQGLEIQEDRIAGEQAESGTGQAA
CLFQSIGKSVFQMREPLDQSLGTVFSESAASSACTEEPRASAGGRGLCAVCCSEREDSLC
SGSVDTGSWPTPLTNTSAAVKNSGLISTLKSKRRRFIYSVSDGASHQGKAVQAGGQAELT
TPSAPFEASALEAPFTFTNADSGLSGSSVKGSCLQDDPEEPSSSLTHSFVTASDTESSYT
NALMSQDLNGKATVVSGEKLRPCTALETDCLPCVPENQCEDDQKSPEVSEGKESVLVSAC
RPAAGAAGAAGAAAVQPSGISSALQEDPAGGRSSTSSLKGAPSLKVPLSQPVVVSGGRVS
WDVPEKLRCENCKDGSDLSRHIPSGDNKICVLREHCKTPGLLPPGKHVTEASPPVKSQFS
QNTNLAVINKDREETLFVAEVAVNISSELSPDSESSFAFQVTQESNKTALGRTVGLQGED
LSQSNGPDLKSAPTAADGDMGDEQTVRALITKASASSALVHACSQKSRNATEQRRKGTAD
KDVKLNSSLGVKSDGTDGDTDKWSGFLDPVLSHNFGGSFRTASNKEIKLSEHNIKKSKMF
FKDIEEQYPTSLACVDINAAPLANQKRLSEPSTLDLQPVTAVSAHSQSRASGSGEDTHTS
PQVLSSKQDFHSNHNLTPSQKAEITELSTILEESGSQFEFTQFRKPSHVAQNNTPEVPGN
QMVAMQTASEEWEDIDLHLTGAPSSSSSSSFSSSVGQTDPSRKCGGSVGGRQSFPCLLKG
SCNKSTSRFLTNVNEMACGGFQSARGTKLSVSSEALQKAVNLFRDIEDVSEETSAKADPR
AFSSSARHDSVASPFKIKKQNSDKSFDGKTSKCQVTLQNNAEMTPGIFVDKNPENDAGNT
KCADKSSPGSQRSVYKVERSEGRKSSTGGTVHEDDRDLPRAADDQCSKDPESCTQYVREA
STQIKECVSDLTCLEAMKAEETCYIQSSDKEQLPPGKREQSIKDFNISFQTASGKNIRVS
EESLNKSLNIFNQETEELIIFSDSLNSKFHCGKNKNKMDISCPKETTSIKKLPIFEERFP
VGTVSQLPTLQQHPECELESIREPTPLGFHTASGKKVRITQESLDKVKNLFDETQYGRET
TSFSHQGSKPLKDRENSKEGLALACERIEIPASKCEEMQEESSVSKEAVVLPTQSDHLCG
QTAHLRTSDGTSSNAEAHGNTDSEAEQGPTTCCVSRSSHSAQDAVLACDTGHGGETGVTE
SSLAKGRKGLREGLGDKPEKRNAAGVECVKGHTEGRVGNALCEHPLDSIRNEVGTNRVSE
NRPSALFGDPSVCHSCPAHSSFCHCDNRRNDSGYFSKNSVDCDAQPDMKRAEDNATFPSV
SATKEVGTHPHTVNEDICVQKRETDSSPCANKNAAIDWAPPDSRSCKLSPPVVVTAHSKE
TVKTVEDTLTDNCNKTFKQTTKSKPDSCQTSCPKALDNSEDFICSSSLDDDSPKTFVCTQ
NEQILQHKQSVCGLERAQIPPVNLGAWDRCKSVRELPWAACASGSCGVFSTASGKTVQVS
NASLEKARQVFSKVDGGAEQPPSMGSLDHSGKRENSVVHPPEAVSSLPKPFPSNASSSVF
SGFSTAGGKRVTVSESALHKVKGMLEEFDLIRTEHTLQHPPTSADVSKILPQPCVGKRTP
EYPVNSKLQKTCNDTFSFPNNYEESASLGNTHSVEVSPQLSQFKQDTQSALGTRVSLKKA
YLLEKDQTFPQNIKTETSQMGAFCGVPVSSTSAKEPENCFETEAVEIAKAFMEDDELTDS
EPSHARFSLLTCPQNEALLSLRTRKRRGVEDGAVGQPPIKRSLLNEFDRIIENRRKSLKP
SKSAPDGTVKDRRRITHHVSLEPVTCAPFCSSEERPGTQSVRFPAPAQGPLSKGQPSGRW
ALETSSSGAAVSLLPTHAVSATRDERTRCSATPRAAKVFVPPFKMKSQLHRGEHCNSKNM
NSERKNQKSRDGESEDVRDSDVRQFNRGSFPQEATRPLTERAEEPLDLMMSLQNARDLQN
MRIQEKGRHRLCPQPGSLYLTKSSTLPRISLQAAVGGRVPSACSHKQLYMYGVSKECINI
NSKNAEYFQFDLQDYFGKEDLCAGKGVQLADGGWLIPSNDGKAGKEEFYRALCDTPGVDP
KLLSSAWVSNHYRWIVWKLAAMEFAFPKEFANRCLNPERVLLQLKYRYDVEIDNSSRSAL
KKILERDDTAAKTLVLCVSDVLSPSTSVSEASASKTSGADPRSLDTIEVTDGWYAVKAQL
DPPLVALVRSGRLAVGQKIITYGAELVGSPDACAPLEAPDSLRLKISANSTRPARWHSKL
GFFRDPRPFPLPLSSLFCDGGSVGCVDVVVQRVYPLQWVEKTASGLYVFRTEREEEKEAV
RFAGAQQKKLEALFTRVQAEFKDREEDRAQQRVPSRALTRQQVHALQDGAELYAAVQSAA
DPEHLEGCFSEEQLRTLNNHRQMLNDKKQAQIQSEFQKALEAAEQEEGLSRDVTPVWKLR
VTSYEGEEKSSLLSIWRPSSDLQSLLTEGKRYRIYHLAVSKSRSKFERLSIQLTATKRTQ
YQQLPAASETLAQVYQPREPLHFSRLLEPAFRPPCSEVDLVGVVVSVVKTAGLAPVVCLS
DESLNLVVVKFGADLNEDIQPRVLIAASNLQWRPESRSGVPALFAGDFSILSASPKEAYF
QERVNRMKQAIENMDTFYKEAEQKLSHLLHGDSPQRSTPTKASAQAPSTCPPLELLATGG
QFGRFSPNSEQSYLSPLSHCTPKEKSASLAQAAQMVSKSCDGDRESEDPKTCRKRRALDF
LSRLPLPPPVSPICTFVSPAAQKAFQPPRSRGAKCATPREEREPRLPQRRALLQKASGAS
LLEHDSVADEELALLDTQALGPGSPEGSQQVFPGDSARTPVPQGQESPQPAQRPGQRAGP
RSRKESVSGTAETAMTMVEN
Download sequence
Identical sequences XP_015861266.1.50099

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