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Domain assignment for XP_016136172.1.42290 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_016136172.1.42290
Domain Number 1 Region: 436-584
Classification Level Classification E-value
Superfamily TRAF domain-like 7.46e-51
Family MATH domain 0.000000136
Further Details:      
 
Domain Number 2 Region: 396-434
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.000000000000523
Family Trimerization domain of TRAF 0.00091
Further Details:      
 
Domain Number 3 Region: 26-74
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000581
Family RING finger domain, C3HC4 0.027
Further Details:      
 
Domain Number 4 Region: 103-161
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0000373
Family SIAH, seven in absentia homolog 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_016136172.1.42290
Sequence length 586
Comment PREDICTED: TNF receptor-associated factor 2-like [Sinocyclocheilus grahami]; AA=GCF_001515645.1; RF=representative genome; TAX=75366; STAX=75366; NAME=Sinocyclocheilus grahami; AL=Scaffold; RT=Major
Sequence
MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCFYCFNR
TVGSGPQKCNACIKEDIFEEPTSILVQGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD
YELSHEGKCEFMILPCPLCKELIRLNEKERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDMSVEKEKIHDHERACA
HEHLNLLLHYIMGMKVRLEGLQPQSLELAGHKAHELHQALRDLETRVSQLSAIPGPTGPP
VQGVPSSSSSSSSSSAVPPPPATLPTSFTPLPSSVGAALELQLHSEKTKVADLGRRCQEL
EVKAGTFEDVVCVLNREVERFATTTEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTV
AEMEGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIY
LNGDGTGRGTHLSLFFVVMRGMNDALLKWSFNQKVTLMLLDQSNREHIIDAFRPDITSSS
FQRPVSEMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKAIVDLTGL
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Identical sequences XP_016136172.1.42290

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