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Domain assignment for XP_016894518.1.100486 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_016894518.1.100486
Domain Number 1 Region: 446-594
Classification Level Classification E-value
Superfamily TRAF domain-like 2.13e-49
Family MATH domain 0.000000168
Further Details:      
 
Domain Number 2 Region: 406-444
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.0000000000000994
Family Trimerization domain of TRAF 0.00085
Further Details:      
 
Domain Number 3 Region: 27-74
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000278
Family RING finger domain, C3HC4 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_016894518.1.100486
Sequence length 596
Comment PREDICTED: TNF receptor-associated factor 2-like [Cynoglossus semilaevis]; AA=GCF_000523025.1; RF=representative genome; TAX=244447; STAX=244447; NAME=Cynoglossus semilaevis; AL=Chromosome; RT=Major
Sequence
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCNACIKEDIFEDPTSILKQGCAFPDNAVRREVESLSAACINENCTWKGSIKE
YEMSHEGHCEFMIIPCPSCKECIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAVASTSSSSAGPSGPSTSAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEKTKV
AELGRRCSELEVKSSTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQLE
RTVGLKDLTVAEMEGRLREMAATTFDGVFVWRISDFGKKRQDAIAGRAPAMFSPAFYTNK
YGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGQSDALLKWPFNQKVTLMLLDQSNREHIID
AFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDGKNSYIRDDTIFIKAIVDLTGL
Download sequence
Identical sequences XP_008323996.1.100486 XP_008323997.1.100486 XP_016894518.1.100486

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