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Domain assignment for XP_017046685.1.74164 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_017046685.1.74164
Domain Number 1 Region: 35-194
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 9.15e-50
Family Rap30/74 interaction domains 0.00000169
Further Details:      
 
Domain Number 2 Region: 507-572
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 6.26e-19
Family C-terminal domain of the rap74 subunit of TFIIF 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_017046685.1.74164
Sequence length 572
Comment PREDICTED: general transcription factor IIF subunit 1 [Drosophila ficusphila]; AA=GCF_000220665.1; RF=representative genome; TAX=30025; STAX=30025; NAME=Drosophila ficusphila; AL=Scaffold; RT=Major
Sequence
MSSAPKSTPSAASGSSTSAAAAAAASVASGSASSSANVQEFKIRVPKMPKKHHVMRFNAT
LNVDFAQWRNVKLERENNMKEFRGIEEDQPKFGAGSEYNRDQREEARRKKFGIIARKYRP
EAQPWILKVGGKTGKKFKGIREGGVGENAAFYVFTHAPDGAIEAYPLTEWYNFQPIQRYK
SLSAEEAEQEFGRRKKVMNYFSLMLRKRLRGDEEEEQDPEEAKLIKAATKKSKELKITDM
DEWIDSEDESDSEDEEDKKKKEQEDSDDGKAKGKGKKGADKKKKKRDVDDEAFEESDDGD
EEGREMDYDTSSSEDEPDPEAKVDKDMKGVAEEDALRKLLTSDEEEEDEKKSDESDKEDA
DGEKKKKEKGKDEGSKDKKKKKPSKDDKKGKSNGSGDSSTDFSSDSTDSEDDLSNGPPKK
KAISKDKEKEIAASSKASTSSSSNANKSRSATPTLSTDASKRKMNSLPSDLTGSDTSNSP
TSTPAKRPKSEISTSLPTSFSGGKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTPV
SSDRLVETMTKILKKINPVKHTIQGKMYLWIK
Download sequence
Identical sequences A0A1W4URC1
XP_017046685.1.74164

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