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Domain assignment for XP_017383547.1.71028 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_017383547.1.71028
Domain Number 1 Region: 389-539
Classification Level Classification E-value
Superfamily TRAF domain-like 2.29e-50
Family MATH domain 0.0000000357
Further Details:      
 
Domain Number 2 Region: 339-388
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 2.88e-20
Family Trimerization domain of TRAF 0.0000865
Further Details:      
 
Domain Number 3 Region: 112-211
Classification Level Classification E-value
Superfamily TRAF domain-like 2.52e-17
Family SIAH, seven in absentia homolog 0.014
Further Details:      
 
Domain Number 4 Region: 43-99
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000106
Family RING finger domain, C3HC4 0.0095
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_017383547.1.71028
Sequence length 543
Comment PREDICTED: TNF receptor-associated factor 3 isoform X2 [Cebus capucinus imitator]; AA=GCF_001604975.1; RF=representative genome; TAX=1737458; STAX=9516; NAME=Cebus capucinus imitator; AL=Scaffold; RT=Major
Sequence
MESSKKMDSPGTLQTNPPLKLHTDRSAGTPIFVPEQGGYKEKFVKAVEDKYKCEKCRLVL
CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE
SRGCAEQLTLGHLLVHLKNDCQFEELPCVRADCKEKVLRKDLRDHVEKACKYREATCSHC
KSQVPMITLQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKE
WSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDS
QAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQL
SRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPF
YTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSR
RHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDL
PDP
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Identical sequences A0A2K5CLD3 A0A2K5R0N9
XP_012326627.1.9421 XP_017383547.1.71028 XP_017383548.1.71028

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