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Domain assignment for XP_017383803.1.71028 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_017383803.1.71028
Domain Number 1 Region: 7-168
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 7.59e-59
Family Rap30/74 interaction domains 0.0000000214
Further Details:      
 
Domain Number 2 Region: 446-517
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 7.62e-23
Family C-terminal domain of the rap74 subunit of TFIIF 0.0000379
Further Details:      
 
Domain Number 3 Region: 171-272
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 0.000000183
Family Rap30/74 interaction domains 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_017383803.1.71028
Sequence length 517
Comment PREDICTED: general transcription factor IIF subunit 1 isoform X1 [Cebus capucinus imitator]; AA=GCF_001604975.1; RF=representative genome; TAX=1737458; STAX=9516; NAME=Cebus capucinus imitator; AL=Scaffold; RT=Major
Sequence
MAALGPSSQNVTEYVVRVPKNTTKKYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMAESGAGSEFNRKLREEARRKKLGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTSYYIFTQCPDGAFEAFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEDEEEKEKRGRRKASELRIHDLEDDLEMSSDASDASGEEGGRAPKAKKKAPL
AKGSRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSMEEPETKAKVPQQEEGPKG
VDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSDESDSSEESDIDSEASSA
LFMAKKKTPPKRERKLSGGSSRGNSRPGTPSTEGGSTSSTLRAAASKLEQGKRVSEAPAA
KRLRLDAGPQSLSGKSTPQPPSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTK
KTGLSSDQTVNVLAQILKRLNPERKMINDKMHFSLKE
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Identical sequences A0A2K5SEY2
XP_017383801.1.71028 XP_017383802.1.71028 XP_017383803.1.71028

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