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Domain assignment for XP_017675453.1.3805 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_017675453.1.3805
Domain Number 1 Region: 181-304
Classification Level Classification E-value
Superfamily Dystroglycan, domain 2 6.93e-60
Family Dystroglycan, domain 2 0.000000579
Further Details:      
 
Domain Number 2 Region: 498-600
Classification Level Classification E-value
Superfamily Cadherin-like 3.92e-17
Family Dystroglycan, N-terminal domain 0.041
Further Details:      
 
Domain Number 3 Region: 61-159
Classification Level Classification E-value
Superfamily Cadherin-like 4.71e-16
Family Dystroglycan, N-terminal domain 0.0000151
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_017675453.1.3805
Sequence length 896
Comment PREDICTED: dystroglycan [Lepidothrix coronata]; AA=GCF_001604755.1; RF=representative genome; TAX=321398; STAX=321398; NAME=Lepidothrix coronata; AL=Scaffold; RT=Major
Sequence
MTVGCLLQPPFLGRTWLPMLLLAASAHCHWPSEPAEVVRDWENQLEASMHSVLSDLRETV
PAVVGIPDSSAVVGRYFRVSIPTDLIASNGEVVQISEAGKDSLPSWLHWNAESSSLEGLP
LDTDKGVHYISVTTLQLFPNGSYVPQTTNVFSVEVHQEDHNEPQSVRVAVQDTGDAAPFV
CGSEEPVTILTVILDADLTKMTPKQRIELLNRMRSFSEVELHNMKLVPVVNNRLFDMSAF
MAGPGNAKKVVENGALLSWKLGCSLSQNSVPNISKVEAPAKEGTMSARLGYPVVGWHIAN
KKPHLPKRMRRQINATPTPLTAIGPPTTAAQEPPTRIVPTPTSPAIAPPTETTAPPVREP
IPLPRKPTVTIRTRGPIVQTPTLGPIQPTRVAEGTGTASVPIRPTMPGYVEPTAVITPPS
TTTKKPRVSTLKPGTPSTTDSSTAITRRPTRRPKTPRPTKPPSTTRSPISKLTTASPPSR
VRTTASGLPRPWEPNEPPKLTNHIDRVDAWEGTYFEVKIPSDTFYDKEDTTTDKLQLTLK
LKEQQMIEENSWVQFNSTSQLMYGMPDRNHIGKHEYFMYATDKGGLFAVDAFEIHVHKRP
HGDKSPVKFKARLEGDHNAVVNDIHKKIMLVKKLALAFGDRNSSTITVQDIAKGSIVVEW
TNNTLPLEPCPREQIRTLSKKIADDSGRPSPAFSNVLQPEFKPLNVSVVGSGSCRNIQFV
PMTKDGRVISEATPTVVAGKDPEKSSEDDVYLHTVIPAVVVAAILLVAGIIAMICYRKKR
KGKLTIEDQATFIKKGVPIIFADELDDSKPPPSSSMPLILQEEKAPLPPPEYPNQSMPET
TPLNQDTIGEYTPLRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP
Download sequence
Identical sequences XP_017675451.1.3805 XP_017675452.1.3805 XP_017675453.1.3805 XP_017675454.1.3805 XP_017675455.1.3805

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