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Domain assignment for XP_018112040.1.7800 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_018112040.1.7800
Domain Number 1 Region: 178-300
Classification Level Classification E-value
Superfamily Dystroglycan, domain 2 3.01e-59
Family Dystroglycan, domain 2 0.000000725
Further Details:      
 
Domain Number 2 Region: 485-586
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000000173
Family Dystroglycan, N-terminal domain 0.047
Further Details:      
 
Domain Number 3 Region: 62-156
Classification Level Classification E-value
Superfamily Cadherin-like 0.000000000000188
Family Dystroglycan, N-terminal domain 0.0000354
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_018112040.1.7800
Sequence length 886
Comment PREDICTED: dystroglycan 1 L homeolog isoform X1 [Xenopus laevis]; AA=GCF_001663975.1; RF=representative genome; TAX=8355; STAX=8355; NAME=Xenopus laevis; strain=J; AL=Chromosome; RT=Major
Sequence
MDIRCAGLSLPMLRTIMVLLMASCAWSAWPSDPTEVAQDWDNQLEASMHSLFPEIKETVA
PMTGIPDSSALVGRPFKIHIPTEFLASSGETIKISEVGKETLPSWLHWEGNFLQGLPLDG
DKGVYDISVASLHLAPNGSYVPHTTDVFSVEVHPEDHNEPQSVRVAGQETAEAIPFLCGT
DEPVTLLTVILDADLTKMTPKQRVDLLNRMRDFSEVELFHMKLVPVVNNRLFDMSAFMAG
PGNAKKVVENGALLSWKLGCGMDQNTVPNISSVEVPAKEGTMSAQLGYPVVGWHIANKKP
QMPKRIRRQIYATPTPVTAIGPPTTAIHEPPERIVPTPTSPAIAPPTDTTAPPVREPIPL
PGKPTVTIRTRGAIIHTPTLGPIHPTRIIETTSIVRPTMTRPIYVEPTAAVTPPSTTTKR
PRVTTMKPATPPTTDSSTTTTKKPTRKPRTRPPKPLATTKAPATKFETTSSSRTRTSTSG
VPNTDPELKNHIDKVVAWVGTYFEVKIPPDTFYDREDGTTDNLQLTLVPRIKASAGEKMW
VMLNSTSQVMYGMPDYIHIGDHEYYLKAADKAGRTAVDALEIQVRNLFQKQPSPVKFHAK
FHGDHNAVINDINKKILLVKKLAFAFGDRNSSSITLHNITKGSVVVDWTNNTFPTEPCPV
EQVESVGKKIYDERGSPRQHFVNSVEPEYKLLNISLSFTGSCKHKNFRYIPMRPEEPIPT
AVAPTVAADRNPEKSSEDDVYLHTVIPAVVVAAILLIAGIIAMICYRKKRKGKLTIEDQA
TFIKKGVPIIFADELDDSKPPPSSSMPLILKEEKAPLPPPEYPNQNVPETIPLNQDSLGE
YTPLRDEDPNAPPYQPPPPFTTPMEGKGSRPKNMTPYRSPPPYVPP
Download sequence
Identical sequences A0A1L8GP44
XP_018112039.1.7800 XP_018112040.1.7800 XP_018112041.1.7800

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