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Domain assignment for XP_018210539.1.52233 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_018210539.1.52233
Domain Number 1 Region: 105-473
Classification Level Classification E-value
Superfamily WD40 repeat-like 3.3e-66
Family WD40-repeat 0.00000476
Further Details:      
 
Domain Number 2 Region: 5-80
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 2.88e-17
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_018210539.1.52233
Sequence length 474
Comment hypothetical protein OGAPODRAFT_100257 [Ogataea polymorpha]; AA=GCF_001664045.1; RF=representative genome; TAX=460523; STAX=460523; NAME=Ogataea polymorpha; strain=NCYC 495 leu1.1; AL=Contig; RT=Major
Sequence
MNYAVLSDRQRSELNKAVIQYLDGIINDSAVVSELRSRLGVPAHENSDTLPNNYLEKKWA
TVVRLQKRIYDMEKEIREYKELVDNYSELLEAAGGMDIRRDKLEWIPSRVKAVLKLHKGS
VTCVSIHPFEPVVVTGSQDGTIAFWNLLDLTEPERVIRNAHTRTINALEFQSRENTVDST
KMVLLASCSSDLLIKLWDSKTGQLVRVLTGHDHLVSGLKFNPADEMQLVSCSRDQSVKIW
DVVSGWCLRTIKGHSDWVRKVDVSSNGEYILSCSNDQSVRLAHFATGAGISLCLGSEQVI
EDSIFLPAETNKYIDPLLDINDETYDVLGYKYCVSGGRDCMLRIWKLRVPDLTNPERPCP
SSNPKAVLLHEFKAHSSWIRSFSMHPNGYYLASCGDDKLIKVWDFRTLASSGQLGPVAQL
RGHENFVNVIAFAAPVVSETSSTNDKIKNRKLLEGGIRCYLVSGSADNTARVWI
Download sequence
Identical sequences A0A1B7SGH7
jgi|Hanpo2|100257|estExt_Genewise1Plus2.C_4_t10336 XP_018210539.1.52233

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