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Domain assignment for XP_018600352.1.37976 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_018600352.1.37976
Domain Number 1 Region: 366-514
Classification Level Classification E-value
Superfamily TRAF domain-like 4.45e-50
Family MATH domain 0.000000195
Further Details:      
 
Domain Number 2 Region: 327-365
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.000000000000366
Family Trimerization domain of TRAF 0.0015
Further Details:      
 
Domain Number 3 Region: 23-74
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000377
Family RING finger domain, C3HC4 0.017
Further Details:      
 
Domain Number 4 Region: 160-233
Classification Level Classification E-value
Superfamily TRAF domain-like 0.00000595
Family SIAH, seven in absentia homolog 0.0088
Further Details:      
 
Domain Number 5 Region: 100-159
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0000477
Family SIAH, seven in absentia homolog 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_018600352.1.37976
Sequence length 517
Comment PREDICTED: TNF receptor-associated factor 2-like [Scleropages formosus]; AA=GCF_001624265.1; RF=representative genome; TAX=113540; STAX=113540; NAME=Scleropages formosus; breed=golden arowana; AL=Scaffold; RT=Major
Sequence
MARVSPAPDPDPAPVGMPQQILAVPMQSKYQCQQCHELLRRPVQALCGHRFCVRCLAQLT
SSGPKPCEACRIEEIFEEPLSILNSSDAFPDNAARREIESLPANCPNEGCSWKGLVKEYE
AQHEGKCMFDRVPCKACRLLILRSEQEKHSERECEERTLNCKYCKASFNFKDIKAHDEVC
QKFPMQCKDCGKKKIPREKFPEHSKSCVKSKVACPFTAVGCRALVEHEKQAEHEQASAQE
HLRLLLDCLCQLRRQGDGPGEWQEDSGPGLYCAPEERPTATAASAKLTATLEQKTTALEN
IVCVLNREVERSSLTLEAFARQHRLDQEKIENLTNKVRQLERSLTLRDMQLSETEQKLRE
LEYCTHDGVFVWKITEFSRRRQEALAGRAPAMFSPAFFSSKYGYKMCLRLYLNGDGTGRG
THLSLFFVVMKGRFDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDITSSSFQRPVSEMN
IASGCPLFCPLSKLAGKSSYLRDDTIFIKAIVDLSGL
Download sequence
Identical sequences A0A1W4Z9B8
XP_018600343.1.37976 XP_018600344.1.37976 XP_018600345.1.37976 XP_018600346.1.37976 XP_018600347.1.37976 XP_018600349.1.37976 XP_018600350.1.37976 XP_018600351.1.37976 XP_018600352.1.37976

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