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Domain assignment for XP_018607780.1.37976 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_018607780.1.37976
Domain Number 1 Region: 1569-1674
Classification Level Classification E-value
Superfamily Bromodomain 2.22e-32
Family Bromodomain 0.00000218
Further Details:      
 
Domain Number 2 Region: 1416-1547
Classification Level Classification E-value
Superfamily Bromodomain 5.23e-32
Family Bromodomain 0.000000276
Further Details:      
 
Domain Number 3 Region: 7-64
Classification Level Classification E-value
Superfamily TAF(II)230 TBP-binding fragment 1.57e-19
Family TAF(II)230 TBP-binding fragment 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_018607780.1.37976
Sequence length 1937
Comment PREDICTED: transcription initiation factor TFIID subunit 1-like isoform X3 [Scleropages formosus]; AA=GCF_001624265.1; RF=representative genome; TAX=113540; STAX=113540; NAME=Scleropages formosus; breed=golden arowana; AL=Scaffold; RT=Major
Sequence
MSDSDSDEDQDRPFSLTGFLFGNINEDGQLEDDSVLDTESKKHLAGLGSLGLGTLITEIT
ASEEDVAEEERDPSGTDAEGWVKSTEDAVDYSDINEVAEDETRKYRQAMGSLQPSRRTDD
EDDYDADCEDIDAKLMPPPPPPTLQTSGKKEEQSTQPANAVGDEGDGIILPSIIAPSSVG
DRVDFSSSSDSESETDRPAQGPGIGGPPGSLTLPLAGIMHRDAAKALPCVTELFPEFRPG
KVLRFLRLFGPGKNMPSVWRSARRKRKRKHRDPQPGTPPPEAEPVEPSPEKKSGWAYEYA
PPPPPEQCLSDDEITMMAPVESKFSQSAGDGDKIPESRPKVAEWRYGPAQLWYDMLGVAE
DGGGFHYGFRLREETSEKPGEQEPKPVPAQEESDVDNDDQTLENELFLMVTQLQWEDDII
WNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLSRSNSQLVPPTPPPITKAPTI
SSGSSKRDKHNQDQQASHEDDSPWFSIFPIDNEELVYGRWEDNIIWDDQSMDRLLSPPVL
TLDPNDENIILEIPDEKEEQTSNSPSKENKKESALKKSRILLGKTGVIKDEPQQNMSQPE
VKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRLFHRPSL
KKYSYGTLSQPGPHPVQPLLKHIKKKAKMREQERQASGGGDMFFMRTAQDLTGKDGDLIL
AEYSEEYPPLIMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLL
QAFENNLFRAPIYLHKMPETDFLVLRTRQGYYIREVVDIFVVGQECPLFEVPGPNSKRAN
THIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSN
WWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSFFAPEEENEEDFQ
MKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKVPNKPTQQKDDKE
PQPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSG
EGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTDSSSAEDSDFEEM
GKNIENMLQNKKTSSQLSHEREEQERKQLQRMLMGEESDRDKGRKERRKGLSSAHSTSSH
KDDDASSVTSLTSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYTRIRTTKDDEF
IRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKFKGPPEKKAKKVKERPDLKLKCG
ACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVL
GKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNKPHKSIHRRRTDPMVTL
SSILEGIINDMRDHPNTYPFHTPVNGKVVKDYYKIITRPMDLQTLRENVRKRMYPSREEF
RESVELIVKNSATYNGAKHPLTQVAQSMLDLCDEKLKEKEDRLVRLEKAINPLLDDDDQV
AFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLENIRKNISKHKYQNR
ETFLNDVSLIHTNSVKYNGSDSPYTKTALEIVNVCKQTLAEYDEHLTQLEKDISTAKEAA
LDAADLESLDPMTPGPYTPQGRHGRGRLGEEESDVDIEGFEEDDDGKPKTPAPAEDGEGD
LEDEDDDEDMLLPPRRRLHGHDEDDEEDEGSSRPAQASVLYQDLLMSDGEDDASEEEGDN
PFSSIHLSESGSDSDREVETRGAPSRGHQEMARMGLEQEESMMSYEGEGADEGQMEDSNV
SYGSYDEAEGRTQRQARGLASGEGYGQSEDDEEDDEEESGARRRGPSVLSQVQLSEDEED
SEEFRSIGGDSDMDSDA
Download sequence
Identical sequences A0A1W5A470
XP_018607780.1.37976

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