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Domain assignment for XP_019233331.1.74238 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019233331.1.74238
Domain Number 1 Region: 1-78
Classification Level Classification E-value
Superfamily N-terminal, heterodimerisation domain of RBP7 (RpoE) 5.89e-22
Family N-terminal, heterodimerisation domain of RBP7 (RpoE) 0.0001
Further Details:      
 
Domain Number 2 Region: 79-169
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.71e-17
Family Cold shock DNA-binding domain-like 0.00013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_019233331.1.74238
Sequence length 177
Comment PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nicotiana attenuata]; AA=GCF_001879085.1; RF=representative genome; TAX=49451; STAX=49451; NAME=Nicotiana attenuata; strain=UT; AL=Chromosome; RT=Major
Sequence
MFFHIVLERNMQLHPRHFGRDLRDKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGANA
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Identical sequences XP_019233331.1.74238

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