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Domain assignment for XP_019352554.1.47583 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019352554.1.47583
Domain Number 1 Region: 180-303
Classification Level Classification E-value
Superfamily Dystroglycan, domain 2 3.53e-60
Family Dystroglycan, domain 2 0.000000586
Further Details:      
 
Domain Number 2 Region: 496-597
Classification Level Classification E-value
Superfamily Cadherin-like 2.35e-17
Family Dystroglycan, N-terminal domain 0.028
Further Details:      
 
Domain Number 3 Region: 61-158
Classification Level Classification E-value
Superfamily Cadherin-like 5.49e-16
Family Dystroglycan, N-terminal domain 0.0000166
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_019352554.1.47583
Sequence length 894
Comment PREDICTED: dystroglycan [Alligator mississippiensis]; AA=GCF_000281125.3; RF=representative genome; TAX=8496; STAX=8496; NAME=Alligator mississippiensis; AL=Scaffold; RT=Major
Sequence
MTVGFLLLPPLLGRTLLTALLMAAYVQCHWPSEPSEVQDWENQLEASMHSVLSDLRETIP
AVVGIPDSSAVVGRFFRATIPTDLIASNGEMVQISEAGKDSLPSWLHWEADSSTLEGLPL
DTDKGVHYISVNAMQLVPNGSYVPQNANVFSIEVHPEDHNEPQSVRVASQDLNEGIPFVC
GAEEPVTILTVILDADLTKMTPKQRIELLNRMRSFSEVELHHMKLVPVVNNRLFDMSAFM
AGPGNAKKVVENGALLSWKLGCSLSQNSVPNISSVEAPAKEGTMSAHLGYPVVGWHIANK
KPHLPKRIRRQINATPTPVTAIGPPTTAIQEPPTRIIPTPTSPAIAPPTETTAPPVREPV
PLPRKPTVTIRTRGPIVQTPTLAPTQPTRLIETTTAVTGQIRPTMTSYVEPTAVVTPPTT
TKRPRVTTLKPATPSTTDSSTATTRRPTRRPKTPRPTKPSGTTRTPITKLETSSPPTRVR
TTTSGIPHVWEPNEPPKLTNHIDRVDAWEGTYFEVKIPSDTFYDKEDTTTDKLQLTLKLK
EQQMIEENSWVQFNSTSQLMYGLPDHSHIGKHEYFMYATDKGGLSAVDAFEIHVHKKPHG
EKSPVKFKARFHGDHNTVANDISKKILLVKKLAFAFGDRNSSTITLQNITKGSILVEWTN
NTLPLEPCPKEQIKAMSKKIADESGSPSPAFSNALDPEFKPINISVVGSGSCKSFQFIPV
TGDGRIISEATPTLAAGKDPEKSSEDDVYLHTVIPAVVVAAILLIAGIIAMICYRKKRKG
KLTIEDQATFIKKGVPIIFADELDDSKPPPSSSMPLILQEEKAPLPPPEYPNQSMPETTP
LNQDTIGEYTPLRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP
Download sequence
Identical sequences XP_014453460.1.47583 XP_019352554.1.47583 XP_019352555.1.47583

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