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Domain assignment for XP_019480902.1.44202 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019480902.1.44202
Domain Number 1 Region: 700-1127
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.56e-111
Family Reverse transcriptase 0.0000000147
Further Details:      
 
Domain Number 2 Region: 241-364
Classification Level Classification E-value
Superfamily Retrovirus capsid protein, N-terminal core domain 9.42e-24
Family Retrovirus capsid protein, N-terminal core domain 0.0024
Further Details:      
 
Domain Number 3 Region: 7-101
Classification Level Classification E-value
Superfamily Retroviral matrix proteins 3.06e-19
Family MMLV matrix protein-like 0.0037
Further Details:      
 
Domain Number 4 Region: 569-680
Classification Level Classification E-value
Superfamily Acid proteases 0.00000000000000844
Family Retroviral protease (retropepsin) 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_019480902.1.44202
Sequence length 1162
Comment PREDICTED: uncharacterized protein LOC109372292 isoform X1 [Hipposideros armiger]; AA=GCF_001890085.1; RF=representative genome; TAX=186990; STAX=186990; NAME=Hipposideros armiger; AL=Scaffold; RT=Major
Sequence
MGNNTSGIKKDSPLGCILANWKHFKLYSLKKKKLIYFCNVTWPKYSLGEQEEWPQNGSLN
GNTIAELYLFCQRSNKSLEIFYVLPFVKLHEDKKHQRSCRVCVASLSKNPDPMAPSASDF
KLLDLIFAPPNLVPRAFLDSLPSSHPVSFAEPLPHAPVPNPSAHSAPNPSPPALSSTRTR
SGLRRPTETPRRRPPPPPPPPLPPLPPPPPPPPPAPAPADSPSPANGCFLFQEVADRSRE
IVRAHEPFSVTDMSQCKEILGNFSDDPNRFQDEIFKLSLTSSLTWQDILDILTHCCTQYE
KALIWGEAQEYADSLVVTNPQHDVIRLARESIPDQNPQWDYRDRLGRARMEHFITCILEG
IKRCQVKQVNYKKIKEITQEKEENPALFLNRLSEAMKKYTNIDPQSVEGRVLLAVHFRTQ
AAPDIKRKLANLEITPHVPLSTLVKEAIKVFNNRDQAKEAKKKKKLKNKIRPPPQDDCRP
RRSAQDKRQGWSGVGWNQCASHKNEGYWKQDCPERHKNRECLDHPRKLGQVSNPNRPSLP
ANLSQEGTASERGGRIVHPALTLDNSITITPAEPRVSPNVAGMKTGFLLDAGAANSVLTR
LVGPLPSRACTVKWIDGKPKVRQSTFPLTCDTGSKTIDHSFLCVPECPVPLIGRDLIMKL
GASVFLQEENGHISEPYQGIYSLYLPEDIKAQVRATVWDTSTPGRAINVEPVKIKLKPGA
KCPWQCQPPLSAKVLRDMEPLLEKFLKHGLIRPCQSPCNTPVFLVKKRNGEQLFVQDLRA
VNKMVIPIHPTIPNSYTLLTQIPRETQYYTVLDLKDPFFCIPLHPDSQYLFAFEWKSPKT
CKVTQYTWTVLPQGFRDSSHLFRNALAKELRELKLQNGTLLQYVNNLLIASTNYQDSQHN
TIMTLNFLALRGYKVSHSKAQISLQKVRYLQFILTPGAQLLDPDRKRAVTSLPVPTTKKE
LRRFLGTAEFCRTWIPNFGLIVKPLYAALKGKERKLLWDQICQQAFETLKTKIDLASVLG
LPDLRKPFFLYIHEEQGIASGVLTQKLGLSQKPIAYLSKQLDSVAQRWPGCVRAVAATAV
LVKEALKLTLGQWLEVFTPHQVQTVLDNGHHCLTETRISKYRALLLHTPDLTLRTCQTLN
PETLLPSTEESIPAWRLKTGLI
Download sequence
Identical sequences XP_019480900.1.44202 XP_019480901.1.44202 XP_019480902.1.44202

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