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Domain assignment for XP_019943896.1.63745 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019943896.1.63745
Domain Number 1 Region: 2058-2247
Classification Level Classification E-value
Superfamily BRCA2 helical domain 1.2e-74
Family BRCA2 helical domain 0.000000606
Further Details:      
 
Domain Number 2 Region: 2416-2550
Classification Level Classification E-value
Superfamily BRCA2 tower domain 6.15e-49
Family BRCA2 tower domain 0.0000777
Further Details:      
 
Domain Number 3 Region: 2248-2385
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.63e-41
Family Single strand DNA-binding domain, SSB 0.00000911
Further Details:      
 
Domain Number 4 Region: 2633-2769
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 5.48e-39
Family Single strand DNA-binding domain, SSB 0.0002
Further Details:      
 
Domain Number 5 Region: 2388-2416,2551-2626
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 5.74e-30
Family Single strand DNA-binding domain, SSB 0.0008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_019943896.1.63745
Sequence length 2918
Comment PREDICTED: breast cancer type 2 susceptibility protein [Paralichthys olivaceus]; AA=GCF_001970005.1; RF=representative genome; TAX=8255; STAX=8255; NAME=Paralichthys olivaceus; breed=gynogenesis; AL=Scaffold; RT=Major
Sequence
MESPPNMYDTFKDEIWKELGPLDPDWFQVLSAETSTSEGNVSDQDDLCANQEGNFKAPCD
KTALDSQLFSTPKVFRHSRVVSPETEGEQSFTAEQAKEARPWNESQSPCLFQMTKERVPG
AKCGGIQPQSLGSFDFLQTSPKSPVSYAKQISESLGAQIHPDISWTSSLNTPPAVPSTLI
LSKTDESPCSMSISADNVVFVRKLFPSLSNKYVAAAVSPKNNDVLAHGGVVSPEAGQNPE
SHNSPQDSLNLSQSVWRQKLPDAIEDGDVRSTIASVLDGAENVLSMFFSNSSSALRKVKT
DRIKRKQIIPTKKRGCSFTDISTTKNAAAVEQSTDDWEPVKVSSPPPPKSRDTGITQWSP
LSLSEIPASSCRDNCHATQVDKKTILEQMRSNSDSGQLTRPHLTGSYYGFTKKKRQFVYT
IETPKIQTQRNETPSLKNDTSPRIPDSGYKVSSKLLGEFQDEADCYRIKEDEKQKNVTEE
NIPLPVQPKSQDLDMSQLCRDFAQDFSQMLDPGKPSEVAQDTPQNGFSPSTCLNAMKQAK
HRARQVNCNNDCDHTTDRRPVSATVQNYSINEGTGGDSGFQSAVADISHLTSASFILPSS
VNIAQSQQWTGFKTDTQRAASSLSTNVKYHSDDILGAEMDAKLPSAVKESQILGGSELHI
KSTSTELPSGAKEGVNNINYSSVKCPSNDSFPERATVSLPSINASGFKTASNKAIEISSA
HLERAKHLFEENKAERTFSAEPTKRANDTEEEISISMDSVKNTISDSKQPPSSSDKFGDI
SCQLTASQKADVTELCTLLEEADSQFEFTQYKTAKLQQHCQDNATSLQKVDKELDPDFLM
GIDFDDSFSSDAEKHKMSSVSDGKTNCEASNLTNKSTLTKENPSTEDAPPSSKSISEGRC
CIVSAEPQNPNRAGYTETSEQENKTPLMLDVGFKTARGNDLSISKERMSKARALFAGLEE
NLTDQKSADKQSSDAVAQTKQRQVMSITHKNAAESFSNSKMDAASFQSGFQLASGKGVPI
SAKAMQEADALFKDCDDKSGAPVKHQENTEQLPTFVCHTKNHLKFKGVRGRKENFSEEAF
GECSKATARPAASHTKVVQHNVEIQSITCKNTPSVTNAISSRENLSSTVKVFSSPSCSTS
KSSGSSGMNQLNNGGGFCTASGKKVSVSADAVKKAERLFNEIQTPGDTNKQLKEEGDALG
AAHVADQIQVGPIQNGGFQTASGKGVVFSVAALKKAKSLFSQCEAVEDEIDVKPTHSKMP
VRGLASRTSGFLAAGGKPLGLSAEALQKAKALFSDITITSELLAVSDTKKSNNSQGNTEN
PDKAHGGFMTAGGATVCLFQKKKFKAKNLLKEYDNCSYSEKTVQEADTFRDIRDRNNGTT
VKYDSGEAPVSGGGSEKKQLSKFKQDQRPTNTSEERGPVGPDVNEKNVLHHDDGKIFEDL
TNGNPSKQLSSPLCTTSEKTDSSAFSKFSNSGGFCTASGKKVCVSDDAMTKAMSLLNESA
FFTDTKLKEEDGTPQSSGKGVALSAQKKEKDTKLPVSCSPLRKDGFLATSGKPLAFSYEA
LRKAKNLFSDIDFSAEVSTVSDTRKSDKHKEAQNNAGKISCGSSTAGGGKVHVSQKNLLK
AKTLLKDFADEETHPSDSSFTSPRATCKSDLSKIKNMGKSTNSALTTASDKDMSAKESAP
EVVESFPSVVTEPENETDCLSVRENALRSASEVKEGKMSTSWEGKLHNTLGKETINMLGC
EVNHTNCSEGPKSKKPQEPSFLIFPFSLNLSGCSETQQRFLAQEALDCTKALLEDESLSV
TSGNEPVQDNQESKATSAEEQKGRGKRLGDDAEMTGQPPLKRRLLEEFDRTVVGPRGSTL
HPQKTCPESVMKDRRAFKFQASPHPNITKPHRNGRNYVETKLQNTTPTQHSTSGGSRSAH
SKMPAFVPPFLKNTETCKNAVLKVNMRTPPEFVPPFKKQRTIVQESSCKPQQEDKHQHLF
VRPANSSTYLPPTKKTQSSTDVAGDKSKEDIPQVPLADTKHDYLTNNHHVPVGCGSEDSA
AKATREDDTISRGQEAFQNLENVELARDMQDMRIRKKKRQKIRPLPGSLFLTKTSGVSRI
PLKAAANGKLPARFTSKQLYGYGVHQHVSDIRSETAEAFRFNLHQFLKLEALRDGGGVQL
ADGGWLIPSNDGTAGKEEFYKALCDTPGVDPKLMSEEWVYNHFRWIVWKQASMERSFPET
TGGLCLTPQQVLLQLKYRYDVEIDHSRRPALRKIMEKDDTSAKTLVLCVCGVGSRGHSSI
GPSGSDTKTPQGADAKVEHPSAVVWLTDGWYAIKAQLDEPLTAMLHKGRLAVGGKLIVYG
AQLVGSQDACSPLEAPESLMLKIGANSTRPARWDTKLGFHRDPRPFLLPVSSLYSNGGPV
GCVDITILRSYPIQWMERKPDAGVVFRSVRAEEKEARRHSSQKQKSMEILFAKIQTEFEK
EQRGNNKPQRRRRTFNRQDIANLQDGEELYEAVEDDPAYLEAHLSDQQLETVQTYRRSLM
EKKQAELQDRYRRALEGESGDGTCPKRDVTPVWRLCISDSRDETGIYQLNLWRPSSDLQA
LLKEGCRYKVYNLTTSEGKKRSGMETVQLTGTKKTQFQDLEAQEWLSAIFQPRVSTSFVN
LQNLEFQPLCGEVDLTGYIISIIDGQGSSPAFYLADGELNFVKVRCFSSFALSGLEDVVK
PRVLLALSNLQLRGQSLAPTPVVYAGDLTVFSTNPKEVHLQESLSQLRNLLQDQQNFFLT
AEEKLLNLLKSDGLSSISSPALHPRTPACATDRRQDAKTSLIAQQPIRSFGSFTPVSKNP
SAPTSLTEKDPKSLKRRRALDYLCRIPSPPALFHLGSVASPCVKKTFNPPRRSGTPSTLI
TEQTPARKPVVSPKEDEWVNDEELAMIDTQKLCVGDLM
Download sequence
Identical sequences XP_019943896.1.63745

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