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Domain assignment for XP_020311322.1.87700 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020311322.1.87700
Domain Number 1 Region: 94-407
Classification Level Classification E-value
Superfamily WD40 repeat-like 3.26e-101
Family WD40-repeat 0.0000000000221
Further Details:      
 
Domain Number 2 Region: 2-76
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 9.68e-26
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000114
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_020311322.1.87700
Sequence length 410
Comment lissencephaly-1 homolog B-like [Oncorhynchus kisutch]; AA=GCF_002021735.1; RF=representative genome; TAX=8019; STAX=8019; NAME=Oncorhynchus kisutch; AL=Chromosome; RT=Major
Sequence
MVLSQRQRDELNRAIGDYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
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Identical sequences XP_020311321.1.87700 XP_020311322.1.87700 XP_020311324.1.87700

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