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Domain assignment for XP_020372114.1.65276 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020372114.1.65276
Domain Number 1 Region: 407-555
Classification Level Classification E-value
Superfamily TRAF domain-like 2.51e-49
Family MATH domain 0.000000288
Further Details:      
 
Domain Number 2 Region: 31-80
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000129
Family RING finger domain, C3HC4 0.03
Further Details:      
 
Domain Number 3 Region: 367-405
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.0000000288
Family Trimerization domain of TRAF 0.0013
Further Details:      
 
Domain Number 4 Region: 108-165
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0000209
Family SIAH, seven in absentia homolog 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_020372114.1.65276
Sequence length 557
Comment TNF receptor-associated factor 2 isoform X1 [Rhincodon typus]; AA=GCF_001642345.1; RF=representative genome; TAX=259920; STAX=259920; NAME=Rhincodon typus; AL=Scaffold; RT=Major
Sequence
MAARSERSPPNSLESQAAGNQSGFPKEILAAKVEGKYLCFECHGILRKPFQAQCGHRYCA
SCLKRIVSTGPQKCAACIQEDIYEEPLSLLDASSAFPDNAARREVENLPAVCNNESCTWK
GTVKEYEADHEGRCEYTLRPCEACSKMVRQLDLPRHLERECPERNLNCKFCKSLFHHKDI
KAHDEICSKFPLTCEWCGKKKIPREKYSDHIRTCGKVKLPCRFNVIGCEITAEKEKLAEH
ENLCVVDHMQMMLQNVMGIKTAVESLQPLHLQQARLKVNQLFTSIREMEETLGPLRSIGL
GERGSSSPGEDLGKHYLSESLEDVQKRCVALKHKAETFENIVCVLNREVERASVSMAAYE
QQHKLDQEKIEALQAKVRQMERATALKDLSIAELELKLQALEHSTDNGIFIWKISDFSRR
RQEAKTQRSPAIFSPAFYTSKYGYKMCLRVYLNGDGVGRGTHMSLFFVIMRGNYDGLLRW
PFKQKVTLLLMDQTNREHIIDAFRPDINSSSFQRPVTEMNIASGCPLFCPLSKLDNKNNY
SREDCIFIKAIVDLTDL
Download sequence
Identical sequences XP_020372114.1.65276 XP_020372115.1.65276 XP_020372116.1.65276

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