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Domain assignment for XP_020854605.1.61212 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020854605.1.61212
Domain Number 1 Region: 182-305
Classification Level Classification E-value
Superfamily Dystroglycan, domain 2 4.58e-61
Family Dystroglycan, domain 2 0.000000434
Further Details:      
 
Domain Number 2 Region: 497-598
Classification Level Classification E-value
Superfamily Cadherin-like 7.38e-18
Family Dystroglycan, N-terminal domain 0.015
Further Details:      
 
Domain Number 3 Region: 63-160
Classification Level Classification E-value
Superfamily Cadherin-like 1.73e-16
Family Dystroglycan, N-terminal domain 0.00000846
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_020854605.1.61212
Sequence length 895
Comment dystroglycan isoform X1 [Phascolarctos cinereus]; AA=GCF_002099425.1; RF=representative genome; TAX=38626; STAX=38626; NAME=Phascolarctos cinereus; AL=Contig; RT=Major
Sequence
MSMTVGFVLLSPLWGRTFFILLMIASAQSHWPSEPSEVVRDWENQLEASMHSVLSDLRET
IPAVVGIPDGIAVVGRSFRLAIPTDLIASNGEIIKMSEAGKEVLPSWLHWDPESRMLEGL
PLDTDKGVHYISVNAMHLAPNGSYVPQAMNVFSIEVYPEDHSEPQSVRVASQDVNEAAPF
VCGADEPVTILTVILDADLTKMTPKQRVELLNRMKSFSEVELHNMKLVPVVNNRLFDMSA
FMAGPGNAKKVVENGALLSWKLGCSLNQNSVPNISSVETPAKEGTMSAQLGYPVVGWHIA
NKKPHFPKRIRRQINATPTPVTAIGPPTTALQEPPSRIVPTPTSPAIAPPTETVAPPVRD
PVPGKPAVTIRTRGAIVQTPTLGPIQPTRVSDTGTTVPGQIRPTTIPGYIEPTAVVTPPT
TTTKKPRITTLKPATPSTTDSSTATTRRPTKKPRTSRPVPRVTTKAPLTRLETASPPTRT
RTTTSGTTRGGEPNKPPSLKNHIDRVDAWVGTYFEVKIPLDTFYDEEDTTTDKLKLTLKL
REQQMVGEKSWVQFNSNSQLMYGLPDSSHLGKHEYFMHATDKGGLSAVDAFEIHVHKRPQ
GDKSPAKFKAKFTGDPASVVNDIHKKIMLVKKLALAFGDRNSSTITLQNITKGSIVVEWT
NNTLPLDPCPKEQIRGLSRRISEDDGKPRHVFSNTLEPEFKAVSISVTGSGSCRHIQFIP
VTADRRIPSEAPPTVVTEKDPEKSSEDDVYLHTVIPAVVVAAILLIAGIIAMICYRKKRK
GKLTIEDQATFIKKGVPIIFADELDDSKPPPSSSMPLILQEEKAPLPPPEYPNQNMPETT
PLNQDTIGEYTPLRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP
Download sequence
Identical sequences XP_020854602.1.61212 XP_020854603.1.61212 XP_020854604.1.61212 XP_020854605.1.61212 XP_020854606.1.61212

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