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Domain assignment for XP_021348276.1.56386 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_021348276.1.56386
Domain Number 1 Region: 1408-1539
Classification Level Classification E-value
Superfamily Bromodomain 2.35e-32
Family Bromodomain 0.00000861
Further Details:      
 
Domain Number 2 Region: 1552-1657
Classification Level Classification E-value
Superfamily Bromodomain 2.88e-29
Family Bromodomain 0.0000445
Further Details:      
 
Domain Number 3 Region: 27-75
Classification Level Classification E-value
Superfamily TAF(II)230 TBP-binding fragment 0.0000000000301
Family TAF(II)230 TBP-binding fragment 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_021348276.1.56386
Sequence length 1918
Comment transcription initiation factor TFIID subunit 1-like isoform X1 [Mizuhopecten yessoensis]; AA=GCF_002113885.1; RF=representative genome; TAX=6573; STAX=6573; NAME=Mizuhopecten yessoensis; strain=PY_sf001; AL=Scaffold; RT=Major
Sequence
MDSEEEHDHDHDHDHDHDGEAQGAVSSLTGFLFGNIDKKGDLEGDFLDEESKRHLGSLSA
LGGIGTMVREITEDQSILVAEEGSDQEESSLNYEKKVAGAVDYSDITEMADDGSERVREA
MNSLQPLKSDNDEEDYDEDDNKLMPPPSWLPNKSGKAEEEGGEIGSPGSQAQTPPKSDKG
SLSDSPDKSKFKTPLAAMLPPELATVEVTTLFPEFEHGEVLRFSRLFRPVHTPHVWRRKK
KKKTEEEDEEAEMKKKQEEEKKMSPLQRMVAHAKEERNQSGTLRPSQDPQGVEDMHVDED
NEEDDFMLNLGRPAQTEECLSDDEEKMMRTEEEKSLTDQNKTSGESEQSLKIEPWRYGPA
QYWYDFIGVDELGCDFDYGFKLKKENTEEEADVSANPNPKKVEFSDEVFLMVTQLQWEDD
IIWNGEDVKHKVIASLKQKAPSAGWIPSTSHRTATQFTTQGKPNDIISGLTPKVPILNPG
YSKTIPGMSPIIKQGEGPDSKDKIYSIFPIENQELVYGRWEDDIIWDSENMTKIPKPQVL
TLDPNDDNIILELPEDNDPNAKSVPAKKEKEIKKSKLLLNKAGITKEDEEDEEKNAPNLQ
EKDPFNISNDEYYSPKTMENAVKGNLGGSLIQHSTPSLELRQPFFPTYMGIGKLRTFHRN
TLKRYSHGALSMPGPHAVLPLLKQIKRKARLRDQERQAYGGGEIFFMRIAQDLTGMDGEL
ILAEYSEEYPPLVMQVGMATKIKNYYKRKPGKDTSPPLYKYGELAYAHTSPFLGSLNPGQ
CIQAFENNMFRASVFEHKVPETDFVIIRKRDNYYIREVCTIYCVGQEATMMEVPGPNSKR
ANNFIRDFLQVFIYRLFWKSKDAPKRIKMDDIKHAFPSHSESSIRKRLKLCADFKRTEEP
DEYGMDSNWWVLKPDFRLPTEDEMRAMVSPEQCCAYYSMLAAEQRLKDAGYGERSLFAPE
DDNEEETQMKIEDEVKTAPWNTTRAFIASLKGKCLLDLTGVADPTGCGEGFSYVKVPNKP
QPKEEGQQQTPQKKTVTGTDADLRKLSLKDAKQLLRKFGLPDSEIRKLSRWEVIDVVRTM
STEQAKAGQDGQVGMSKFARGNRFSVAEHQERYKEECQRIFDLQNRVLSSNEVLSTDDDS
SSGNESDFEEMGKNLESMLVNKKTSSQLSHEREEAERRELHKMMLLGEDSKDKNKQKEDD
LNAANMTGRKLKITRTFRNDEGKEYTRTEWVLKPAVIDTYVRIREKKDPSFIKNFAAMDD
SMKEDMRREKRRLQERLRRIKRNEEREKFAPPPVKKKKKQEPLSIKASKLKCGACGQIGH
MRTNKECPNYNKVGNVAPVQVAMTQEEEEEEEKNLLVDNDLINVEGTKIKFSKNLVEHAE
QVKRKSLLLKFPKQAYKPEKKKRVGSVIHCDYLKKPKQTSNRRRTDPIVTLSTVLESVLN
EMRDMPNAQPFLFPVSTKEVPDYYRVVKIPMDLQTIREGLRNKRYISRETFLIDVNQILE
NSKMYNGAKSALTLTAQQLLNLCLKRFAEKEDKLMRLEKAINPLLDDNDQVAFTFILENI
IAQMKAVENTWPFHGPVNKKFVKDYYEVIQRPMDLATLLKRVQAHKYQTREVFIEDVELI
PINCSKYNGKDNPLTETAYKMVDVCRQALSQNEEHLIQLEADIRAAQEAALEAVETDSIM
TGTSANPDDYSLLGMDNESMDEANSLGTSRENITIAEDNSSPSKRWAGDDSGMSGGVVPE
EYDSEFVDVEGDVEGDDENVVDMSFGQQSSDQTSDQVMNTTGEVDESLIQDLQLSPENSD
SEDQGMGKQSDSEEEGDTSMDMQAYEDGRQYYDGTAQSYMAPPPQDIDENSFDPSDFFMH
SALASEAAAQHVTDNKDGDDINMDLQVSESEESDADQEGAEQGEDQSNDGFDIDEFLQ
Download sequence
Identical sequences XP_021348274.1.56386 XP_021348276.1.56386 XP_021348277.1.56386

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