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Domain assignment for XP_021420355.1.32639 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_021420355.1.32639
Domain Number 1 Region: 94-407
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.38e-101
Family WD40-repeat 0.0000000000223
Further Details:      
 
Domain Number 2 Region: 2-76
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 9.68e-26
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0000114
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_021420355.1.32639
Sequence length 410
Comment lissencephaly-1 homolog B-like [Oncorhynchus mykiss]; AA=GCF_002163495.1; RF=representative genome; TAX=8022; STAX=8022; NAME=Oncorhynchus mykiss; AL=Chromosome; RT=Major
Sequence
MVLSQRQRDELNRAIGDYLRSNGYEEAYSTFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTLGGPVAQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDMHRTAPYVVTGSVDQTVKVWECR
Download sequence
Identical sequences A0A060WAU8
XP_021420355.1.32639 XP_021420364.1.32639 XP_021420370.1.32639

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