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Domain assignment for NP_001001811.2.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001001811.2.45394
Domain Number 1 Region: 25-107
Classification Level Classification E-value
Superfamily HMG-box 2.75e-29
Family HMG-box 0.00000908
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001001811.2.45394
Sequence length 300
Comment transcription factor Sox-3 [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MYNMMETEIKSPIPQSNTGSVTGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMH
RYDMAGLQYPMMSTAQTYMNAASTYSSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSADHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI
Download sequence
Identical sequences A9JSZ3 Q6EJB7
NP_001001811.2.45394 7955.ENSDARP00000070099 ENSDARP00000070099 ENSDARP00000070099

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