SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001015796.1.99540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001015796.1.99540
Domain Number 1 Region: 2-185
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.02e-47
Family Calponin-homology domain, CH-domain 0.00000605
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001015796.1.99540
Sequence length 297
Comment calponin-1 [Xenopus tropicalis]; AA=GCF_000004195.3; RF=representative genome; TAX=8364; STAX=8364; NAME=Xenopus tropicalis; strain=Nigerian; AL=Chromosome; RT=Major
Sequence
MYGHFNKGPAYGLSAEVKNKLAQKYDVQKEAELREWIEGLTGRTIGKGFMDSLKDGIILC
ELINKLQPGTVRKINEATQNWHKLENIGNFIKGITQYGVKPHDIFEANDLFENTNLTQVQ
YTLLALASVAKTKGATVDIGVKYADRQERKYDLDKLKEGRNIIGLQMGTNKYASQKGMTS
YGTRRHLYDPKLANDQPLDQATISLQMGTNKGASQSGMTAPGTKRQIFDQKLGMEHCDTQ
TISLQMGSNKGASQQGMTVYGLPRQVYDSKYCNAPEYLLAEDQDGQYNNSHQYYNSE
Download sequence
Identical sequences Q5FVW2
NP_001015796.1.99540 8364.ENSXETP00000036492 gi|58476796|gb|AAH89746| gi|62751948|ref|NP_001015796| ENSXETP00000036492 ENSXETP00000036492

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]