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Domain assignment for NP_001021806.1.50509 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  NP_001021806.1.50509
Domain Number - Region: 47-110
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0288
Family Spectrin repeat 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001021806.1.50509
Sequence length 794
Comment Conserved Oligomeric Golgi (COG) Component [Caenorhabditis elegans]; AA=GCF_000002985.6; RF=reference genome; TAX=6239; STAX=6239; NAME=Caenorhabditis elegans; strain=Bristol N2; AL=Complete Genome; RT=Major
Sequence
MEIDHMRTVELLAAKAATWGLPEAVEDAESDTEEDVVGLISGALKDIKKREKDLAELQFP
PEITAIRSNMKRFRDLQKQIDNSKATMNELREAYESVSSRTCSLHDACDRALAEQTSLST
GSQLIKTNLYYFKQADAIMKKLSVAKLMVTGHSFAAILVSIDECLTYLRAHPEYKESEAY
ISKFEQCLSRAMTWVRVAVLADLEACFNAVKDRQAQLELDYEKIGRAGQEEDTFALLYGV
FASKAAVVKASINVVEQRFSAVPEFEEMLAECQYAYFAKRNLLLGPILESTLANLSGTHD
DSTCRLTRDACTFMLRTCDDEYRLYRQFFVTRHTEERKLSTDGRISPAMSTITSVFTSAQ
SPQQVHPFETFSEQMCRTLYDMLRPRIVHNPHLETLAELCTMIKIEMIENRCSLQMVASI
LGDDASNDQNVSGLNPRAGFVSVMSELVGDIAERIVYRAGMYAQNDIAAYRPAAGDIAYP
QMLQMIRKIENEQKEQQEKEPEEGSAPATAIDQHCLWYPTVRRTVMCLSKIFPCLDIGVF
HSLARDMLFSCIDSLETASKAIMESPAPAKGWSKKLDAHLFVVKHLLILREQTAPYRQNV
LSFRSDSLNTKDFSIDFSKFTNVLFDSKSKWFELSTDNALLELITTVPIEMREQEGDSRR
VLDQQLRASTFRLAHEASLLMIRDLADWIEIAEDERMKEGFQLSGHPKLAAGVLKDVSAV
AYRNVGTKFTEIRAAYTLYIGVPETEEILLSPVRKRVIDIFTRVISFASKTYDAESLAIA
GLPNVQQLILLLNK
Download sequence
Identical sequences Q6AW08
Y71F9AM.4a 6239.Y71F9AM.4a Y71F9AM.4a Y71F9AM.4a.1 NP_001021806.1.50509

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