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Domain assignment for NP_001030372.2.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001030372.2.76553
Domain Number 1 Region: 17-89
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000000144
Family RING finger domain, C3HC4 0.0087
Further Details:      
 
Weak hits

Sequence:  NP_001030372.2.76553
Domain Number - Region: 252-283
Classification Level Classification E-value
Superfamily SAP domain 0.000152
Family SAP domain 0.0068
Further Details:      
 
Domain Number - Region: 201-233
Classification Level Classification E-value
Superfamily Rad50 coiled-coil Zn hook 0.00785
Family Rad50 coiled-coil Zn hook 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001030372.2.76553
Sequence length 456
Comment E3 ubiquitin-protein ligase RAD18 [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MDSLAEPRWPPALAVMKKVDDLLRCGICFEYFNIAMMIPQCSHNYCSLCIRKFLSYKTQC
PTCCVTVTEPDLKNNRVLDELVKNLNFARNHLLQFALESPPISAASSSSKNLATKADTAV
AFRHSLKQGSKLMENFLIRESGGSASELLIKENESKLSPQKKLSSPAKTRGTPSAVKSAP
GSSEDSVLETPSTSALKQVTKVDCPVCGVKIPENHINKHLDSCLSREEKKESLRSSVHKR
KPLPKTVYNLLSDRDLKKKLKQHGLSVQGNKQQLIKRHQEFVHMYNAQCDALHPKSAAEI
VQEIENMEKTRMRFEASKLNESVMVFTKNQTEKEIDEIHSKYRQEDNKIKSSDTPSVETN
HFRQSKLDFPGKLERSRQDDSFSCTDIQEEALSSSESDSFKSSSSDIIRDLLEEEEAWEA
SHKNDFQDREISPGQNRRTRSAESAELEPRNKRNRN
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Identical sequences Q32LH8
ENSBTAP00000044535 ENSBTAP00000044535 9913.ENSBTAP00000044535 NP_001030372.2.59421 NP_001030372.2.76553

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